Rhododendron vialii: 131318579
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Entry
131318579 CDS
T09330
Name
(RefSeq) protein RNA-directed DNA methylation 3-like
Organism
rvl
Rhododendron vialii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
KOW1_SPT5
KOW4_SPT5
zf-CCHC_3
Spt5-NGN
KOW
KOWx_SPT5
KOW5_SPT5
Spt5_N
Motif
Other DBs
NCBI-GeneID:
131318579
NCBI-ProteinID:
XP_058204447
LinkDB
All DBs
Position
3a:complement(14749711..14758784)
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AA seq
1737 aa
AA seq
DB search
MASKKGKEVAGEESSGKRKRGGGNEKAGSGRRKRNNRGVLQFFDDDAYELEEDEDESSDD
SDLDEDGFLEDEFKTTDKGKNDFGKDHQFPLFPKEEEMSEEELEKMMEERYRPGASFVTY
AEDAYGSKRPMDVDAVIASSREPTIWKIKCMVGRERHSAFCLMQKFVDLVALGTKLQIIS
AFALDHVKGFIYIEAERQNDVNEACKGLCSIYSSRVTPVPSNEISHLLSVRSKYNEVSVG
TWARVKSGKYKGDLAQVVSIDDARKKATVKLIPRIDLQALAEKYGGGVASKKTAKGGGIA
SKKTATPTPRLISSTELEEFRPLMQYRRDRDTGQAFEVLDGMMLKDGYLYKKVAIDSLNF
WGLIPSEDELLKFEPCKKEEPDSQEWLTQLFGEKKKRTRCENGGGNDKVGGKDKGGGKGE
GSSSAGTASSFEVHDLVVFGRKDFGVIVGTEKEDYFKILKEGSEGPVVVSIELRQLKNAS
FDKKFHALDHRMKTISVNDTVRILQGPLQGRQGIVKQIYRGIIFLYDENEQENGGFICCK
SQICEKTKLSVDACKGKEDESGFQGFEDISSSPKSPLSPKKAWQASEKSSNFNRDDKDGM
FSIGQSLRIRVGPLKGYLCRVLAVRRSDITVKLDSQQKILTVKSEHLAEVRGKSSAISMG
DDVDSAKPFDLLGTQDGSTDWMGGAGTSVEGDRWGAGGLSTERSSWPAFPSSGFTIQPES
SSANADNNSNVEDDGPWGTKATKKQNSSWGNAVANEEAVGDQSAWGGSAAVPKNQTGGWG
SGGGSSGQSEAEASGWNKATNMDGSQTGSWGAVKKDGATAWGKSADPLESSAGMGSGESS
WGKPAAPDMWGSKEDSSGNKAAWNNSNAAPESQTGGWGSNAGGSDPWNKQDGGGSSWNKQ
GGGSSWASKQSDANTEDELREGKFDGGRGSGGGRGRGGGGNACFKCGETGHMARECTQGG
GGGRGGSGSGGNACYKCGETGHMARECTQGGGGGNACYKCGETGHMARECTQGGGSGGGN
ACFKCGETGHMARECTQGGGGGNACYKCGETGHMARECTQGGGGGRGGGGGGGNGCFKCG
ETGHMARDCSQGGGGSGRYGGGGGNACFKCGETGHMARDCSQGGGDGGGGWRSSGGAGEG
GSLGKAAESKNQTGGWGMGGWNSAQSSVETKSQTGGWGNAGGSKAEPNNEKGGWGTGGGT
SVQSSVETKSQTGGWGTAGGSKAEPNNEKGGWGTGGGTSVQSDSEPKNQTGGWAKASGST
AETQNQTGGWGSAGGNRQSDAEPKGQTGGWNNAGGSNAEPKNRSGGWGNTGGSIAESQNQ
TGGWGNTGVSKAEPKVQTGGWSTGGSSAQLDAEPMNKSGPWANAGGSKSGKPSNQAGGWG
TAGKSEAEPLNQTAGWGSTGGSKAEKSQTGGWGTAGKSEAEPLNQTAGWGGSGGSNAEPK
NQTGEWGISGGKSGQSEAELSSWGKTKKEGAISWGNSMDTQESTPVMGSGENSWGKPASG
SKSVWNSSTSSAPESKTGGWGSDAGAASLSKQDGGGSSWSKQGGGSSWGNQTGGSSWSNA
EKKDQNDSWGKPSGGDQGFGGSGGGRGRGGGGNACYKCGETGHMARECPQGGGGGRGGGS
GGGNACYKCGEAGHMARDCSQGGSGGGGRYGSGGGGNSCYKCGETGHMARECPQGGGGGG
RGGAGGGNACFKCGETGHMARECPQGGGGGRGGGGGGGCYKCGEQGHFARECPNSSR
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctaagaagggtaaagaggtcgccggcgaggaatcatcggggaagaggaagcgc
ggcggcggcaacgagaaggccggcagcggtcgccggaagaggaacaaccgcggcgttctc
cagttcttcgacgacgacgcgtacgagctcgaggaggacgaggacgagtccagcgacgac
agtgacctcgacgaggatggcttcctggaagatgaatttaaaacaactgacaaaggcaaa
aatgattttggaaaagaccatcagtttccactttttcccaaagaggaggagatgagtgag
gaagaactggaaaaaatgatggaagagcgttacagaccaggtgccagtttcgttacgtat
gcagaagatgcatacgggtctaaaagaccaatggatgtagatgcagtcatagcttcttcc
agggaacctaccatctggaaaattaaatgcatggttggacgtgagaggcattctgctttc
tgcctgatgcagaagtttgtggacttggttgcccttggaaccaagttgcagataatttct
gcatttgcgctagaccatgtgaagggctttatttacatcgaagcagaaaggcaaaacgat
gttaatgaggcatgcaaaggtctctgttctatatattcgagccgggtgacacccgtccca
agtaatgaaatttctcatttgctctctgtgcgaagcaaatacaatgaagtgtcagtgggc
acttgggcccgggtgaagagtgggaaatataaaggggatctagcacaggtcgtatctata
gatgatgcacggaagaaagctacagtgaagctgatacctagaattgatctacaagcattg
gctgaaaaatatggtggaggagttgcgtccaaaaagacggctaagggtggaggcattgct
tccaagaaaacggctacaccaacacctagattgatcagctctactgaacttgaggagttc
cggcctctcatgcaatataggcgtgaccgcgatactggccaagcttttgaggttcttgac
gggatgatgctcaaagatggttacttgtacaaaaaagtagcaattgactcattaaacttc
tggggtttaataccttctgaagatgaactcctgaagtttgagccttgtaagaaagaagaa
cctgattctcaagagtggcttacccagctttttggtgagaaaaagaagcgcacaaggtgt
gaaaatggtggtgggaatgacaaagttggtgggaaggacaaaggtggtgggaaaggagag
ggttcatcaagcgctggcacagcaagtagttttgaagtgcatgatcttgtggtttttggg
cggaaggattttggtgttattgtaggcacggagaaagaggattatttcaagattttgaag
gagggttcagaaggaccagtggtggtgtctattgaactgcgtcagttgaagaatgcatcc
tttgataagaagtttcacgccttagatcaccgcatgaagacaatatcagtaaatgataca
gtcaggattttacagggcccattgcagggtcgtcaagggattgttaagcaaatttataga
ggaataatctttttatatgatgaaaatgaacaggaaaatggtggtttcatctgttgtaaa
tctcagatctgcgagaaaactaaactttctgtcgatgcatgtaaaggaaaggaagatgaa
tcagggttccaaggctttgaagatatctcgtcatctcctaaatcccctctatcccctaaa
aaggcttggcaagctagtgaaaagagcagcaatttcaaccgagatgataaagatggaatg
ttctctattggccagtccttaagaattagagtaggtcctcttaagggatatctctgccgc
gtattggctgtgcgtcgttctgatatcactgtaaagcttgattctcagcagaaaattctt
acagttaaaagtgaacatcttgctgaggttcgtgggaagagttctgccatttccatgggt
gatgacgtggactctgcaaagccatttgatcttcttggaactcaagatggctcgacagat
tggatggggggagcaggaacgtcagtagagggcgatagatggggtgctggagggctgtct
acagaaaggagttcttggcctgctttcccatcttcaggttttacgattcagcctgagtcc
agttctgcaaatgctgacaataattcaaatgttgaagatgatggcccttgggggactaaa
gcaactaaaaaacagaactcttcatggggtaatgctgtggctaatgaggaagctgttgga
gatcagtctgcatggggtggttctgcagctgtacccaagaatcaaaccggtggatggggc
agcggaggtgggagctcaggccagtcggaagctgaagcaagtggctggaataaagctacc
aacatggatggatctcaaactggaagttggggggctgtgaaaaaggatggtgcaacagcg
tggggaaaatctgcagatcccctagagagtagtgctggtatgggatccggagaaagttct
tggggcaaacctgcagcaccagatatgtggggcagcaaagaagattccagtggaaacaag
gcagcctggaacaattctaacgctgcaccagagagtcaaactgggggatggggtagtaat
gctggagggtcagacccttggaataaacaggatgggggcggatcttcttggaataaacaa
ggtggtggatcttcttgggctagtaagcaatctgatgcgaatacagaagatgagttgagg
gaagggaaatttgacggaggtcgtggttcgggtgggggaaggggaagaggaggaggtggg
aatgcttgcttcaagtgcggggaaacgggccatatggcaagggagtgtactcagggtggt
ggaggtgggaggggaggcagtggcagtggtgggaatgcgtgttacaagtgtggcgaaact
gggcatatggctagagaatgcactcagggaggtggtggtgggaatgcttgctataagtgt
ggggaaacggggcacatggcgagggagtgcactcagggaggtggaagtggtggtggaaat
gcttgctttaagtgtggtgaaacaggacatatggccagggaatgcactcaaggtggtgga
ggtgggaatgcttgctacaagtgtggcgaaacaggacatatggccagagaatgcactcaa
ggtggtggaggtgggagggggggaggtggtggcggagggaatggttgcttcaagtgtggg
gaaacgggacatatggccagggactgcagtcagggtggcggtggaagtgggaggtatggt
ggtgggggagggaatgcttgcttcaagtgtggggaaacgggacatatggctagagactgc
agtcagggtggtggcgatggaggtggaggctggaggtctagtgggggagccggtgaggga
ggttcattgggaaaagctgccgaatccaagaatcagactggaggatggggtatgggtggt
tggaactctgcccaatccagtgttgaaaccaaaagtcaaactgggggatggggtaatgca
ggtggttccaaggctgaacccaataatgaaaaaggaggatggggtactggaggtgggacc
tcagtccaatccagtgttgaaaccaaaagtcaaactgggggatggggtactgcaggtggt
tccaaggctgaacccaataatgaaaaaggaggatggggtactggaggtgggacctcagtc
caatcagattctgaacccaagaatcaaactggagggtgggctaaagcaagtggttctact
gctgaaactcaaaatcaaactgggggatggggtagtgcaggtgggaaccgccaatcagat
gctgaaccgaagggtcaaactggaggatggaataatgcaggtggttctaacgccgaaccc
aagaatagaagtgggggttggggtaatacaggtggttctatagctgaatctcaaaatcaa
actggtgggtggggcaatactggtgtttctaaggcagaaccaaaggttcaaactggggga
tggtctacaggtgggagttcggcccagttagatgccgaacctatgaataaatctgggcca
tgggctaatgctggtggttctaagtctgggaaacccagtaatcaagctggtggatggggt
actgcaggcaaatcagaagctgaacccttaaatcaaactgcaggttggggtagcacaggt
gggtctaaagctgaaaaatcccaaactggaggatggggtactgcagggaaatcagaagct
gaacccttgaatcaaactgcgggttggggtggctcaggtggttccaatgctgaacccaag
aatcaaactggggaatggggcatttcaggtgggaagtcaggccaatcagaagctgagtta
agtagctggggaaaaaccaaaaaggaaggggcaataagttggggaaattccatggatacc
caggagagtactcctgttatgggatccggagaaaattcctggggcaaaccagcaagcgga
agcaaatcagtgtggaatagttctacctcttctgcaccagagagtaaaactggaggatgg
ggtagtgatgctggagcagcttcattgagtaagcaggatgggggaggatcttcgtggagc
aaacaaggtggtggatcttcttggggaaatcagacaggaggatcttcttggagcaatgca
gagaagaaagatcaaaatgacagctggggtaaaccatctgggggggatcaaggatttggt
ggttcaggtggtggaagggggagaggtggcggcgggaatgcgtgctacaagtgtggggaa
acggggcatatggctagggaatgcccacagggcggtggcggagggagaggtggaggcagt
ggtggcggtaatgcttgctacaagtgcggggaggcgggacatatggccagggactgtagc
cagggtggcagcggaggaggtgggaggtatggtagtggaggtggtgggaattcttgctac
aagtgtggggaaacgggacatatggctagggaatgccctcagggtggcggcggcggcggg
agaggtggggctggtggtggcaatgcttgcttcaaatgtggggagacgggacatatggcc
agggaatgccctcagggtggtggaggtgggaggggtggtggcggaggaggtggttgctac
aaatgtggcgagcaagggcatttcgctcgagaatgccccaactcttcccgttga
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