KEGG   Rhododendron vialii: 131318603
Entry
131318603         CDS       T09330                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
rvl  Rhododendron vialii
Pathway
rvl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131318603
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rvl03041]
    131318603
Spliceosome [BR:rvl03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    131318603
SSDB
Motif
Pfam: WD40_Prp19 WD40 EIF3I WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_EML ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_WDR19_1st NBCH_WD40 PRP4 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_SCAP WD_LRWD1 eIF2A WD40_like PROPPIN Beta-prop_WDR75_2nd Draxin Beta-prop_SPT8
Other DBs
NCBI-GeneID: 131318603
NCBI-ProteinID: XP_058204486
LinkDB
Position
3a:complement(3831148..3837299)
AA seq 564 aa
MDVDDDNSVSTSVMEPSAAVIDGQTVVATGPVPIQPVPIIGPPLGSPVPPIPTQLPSITP
QLAPLPPVVRQPQAQQNGEVSPSDSDSDNDGSGPTPSTAEYEVSEQSRQIRERQEKMMQE
LLIKRRAAALAVPTNDMAVRARLRRLSEPITLFGEREMERRDRLRMLLAKLDAEGQLERL
MKAHEDEEAAASATKDEAEEDIQYPFYTEGSKALLQARVEIAKYSLPRAALRLQRARRKR
DDPDEDLDAEIDWALKQAGSLVLYCSEIGDDRPLSGCSFSHDGNMLATCASSGVAKLWSM
PQVEKVSTLKGHTERLTDVAFSPVDNYIATASADRTARLWNTEGSLLKTFEGHLDRLGRI
AFHPSGKYLGTTSFDKTWRLWDIDTGEELLLQEGHSRSVYGLTFHRDGSLAASCGLDALA
RVWDLRSGKSILALEGHVKSVFGISFSPNGYHLATGGEDNTCRIWDLRKRKALYVIPAHS
NSLSQVKFEPEEGYFLVSASFDMTAKVWSSRDFKPVQTLSGHEGRVTSLDIAGDGQHIAT
VTSDRTIKLWSSRNSGKEKDMEID
NT seq 1695 nt   +upstreamnt  +downstreamnt
atggacgtggacgatgataattccgtttcaacttcagttatggaaccttccgctgcagtc
attgatggccaaactgtagttgcaaccggtccggttccaattcaaccagttccaattatt
ggacctccacttggctctcctgttcctccaatacccacacagcttccctcaatcacccct
caattggctcctctcccgcctgtcgttaggcaaccccaagcgcagcagaatggtgaggtc
agtcccagtgactcagactctgacaatgatggttcaggccccactccgtctactgcagaa
tacgaagtttcagaacagagcagacaaatcagagagaggcaagaaaagatgatgcaagaa
ttactgataaagcggcgtgctgctgccctagctgttcctacaaatgacatggctgtgcgg
gcccgtctacgtcgccttagtgaacccataaccctttttggagaaagggagatggaaagg
cgggaccgcttgaggatgctcctggcaaaactggatgctgaagggcaattagagaggctc
atgaaagctcacgaggatgaagaggctgcagcttctgcgacaaaggacgaagctgaagaa
gacattcagtacccattttacactgaagggtctaaagcacttttgcaggcccgagtagag
attgcaaagtattctcttccgagggcagctttgcggcttcaacgtgcaagaaggaaaagg
gatgacccggatgaggatttggatgcagagatagattgggctttgaagcaagctgggagc
ttggttttatattgcagtgaaataggagatgacaggccgctttcaggatgttctttttcg
catgatggaaatatgcttgcgacatgcgcttctagcggagttgccaaattatggagcatg
cctcaggtggagaaggtttctaccttaaaagggcacacagaacgtttaactgatgttgct
ttttctcccgtggacaattacattgcaactgcctctgctgaccggactgcaaggctttgg
aatacggaagggtctctcctgaagacattcgagggccatttggatcgtctaggtagaatt
gccttccatccatcagggaagtacttgggaacaactagctttgacaaaacttggagatta
tgggatatagatactggcgaggaattgcttctccaagaaggtcatagtcgaagtgtgtat
ggattaacctttcaccgtgatggatctttagctgcgtcttgtggtctagatgcacttgct
cgtgtatgggaccttcgttctggaaaaagtattctcgccttggaaggccatgttaaatcg
gtttttggtatcagtttttctcccaatggctatcatttagccacaggtggtgaagataat
acttgccgaatttgggacttgaggaaaagaaaggcattgtacgtaataccagcacactca
aattctctctctcaagtcaaatttgagcctgaagagggatactttttggtttctgcctca
tttgatatgacagccaaggtttggtcatctagagatttcaagcctgtccagacattatct
ggtcatgaaggacgagttacatctctggatattgcaggagatggacagcatattgcaact
gtgacgagtgatcggaccatcaaactttggtcaagcagaaacagtggtaaggagaaagac
atggaaatcgactag

DBGET integrated database retrieval system