Rhododendron vialii: 131318710
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Entry
131318710 CDS
T09330
Name
(RefSeq) DNA replication ATP-dependent helicase/nuclease JHS1 isoform X1
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
rvl
Rhododendron vialii
Pathway
rvl03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
131318710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rvl03032
]
131318710
Enzymes [BR:
rvl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
131318710
DNA replication proteins [BR:
rvl03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
131318710
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
131318710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dna2
AAA_12
AAA_11
AAA_30
AAA_19
Viral_helicase1
UvrD-helicase
Cas_Cas4
nSTAND3
ResIII
Dna2_Rift
DUF7372
AAA_18
FeS_assembly_P
AAA_29
Motif
Other DBs
NCBI-GeneID:
131318710
NCBI-ProteinID:
XP_058204636
LinkDB
All DBs
Position
1a:complement(19079125..19100968)
Genome browser
AA seq
1377 aa
AA seq
DB search
MPPKKKLNSASKKSNQNSQPSKFGIQHFFHRHTLTQNHPKTQQTPDPNTNKLQIPTNGSL
PPEKSGPIAALSAAPNSKKIALDSAVRNPTNDSRTTETTNSQNTPPENLLPAAVNAGENQ
SEVSPEICKSVSVKRFKFSPGMLIKQSQDDGGDEITWKISPVNDRLHAVSKHLPDMVKVL
AESSRINSLDFHHCQLNKSSPRSPGKIEKWLSSPPLKSTEKSSLSTNGVSLKRFNPNLDI
GFHRSQENSNDNSNTCVTNSPSPFKTPPSLSYCHDKPDDGAGPHETTDQLDSRQHKKALL
ELLDQVEGVLSVDESESKGMETCIAEVQAGNSGEKFVKAHPVVNSLVTNLPRNVKREISN
IYCLVLEVSEKRGTVNSSGSQCPFKVLRLLNEQSGEERVVHLWDEWVYSVIAPGDTIHVI
GKFDGQGKCDVNRDQNYIIVHPEVLVSGTRVAASFSCPRRTVLDERLKCSEQSVAALTGT
LLHQIFQAGLTREDLTKEFLEEYARMVLQKNIESLYACGVNEYEMHKTLIEGIPRMLNWI
LLFRETQDSKLPSVDFGSNGGLKKVRVTEVVDIEEMAWAPKYGLKGMIDASIQVEVTSSA
HEVYEKIMPFEFKTGKGTSGQSAMEHSAQVMLYTLLMSERYLKTIDCGLLYYLHTDRTQG
IAVRRSDLVGLIMRRNELASDILKASTSQQLPPMLQSPSMCKGCRHLNACTVYHKAQGGS
TKDSGLGDMFVSLVSHLTSRHCAFLRRWEQLIDLEAKEIQNAKKDIWWSSNSRHEKSSSC
LSSVILDTSDEIPQTKFSKGNRFIYRFVRQELPQLGGVARNGDSLSTGSSPVDGSNCSLR
SGDYVILSTEDGRLTVASGIIMDISRSNVTVSFSKRLRLPGSSPSSMAQDLHHEVWRIDK
DEAMTSFAIMRFNLIQLFLQNEHSFHQRRMIVDLEAPRFDSGCIFSQDPAISYIWSEKNL
NNDQRRAIIKILTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL
LKLKAQGIDFVRIGRNDAVHEEIRGHCFSAMDIHSTEEIKVRLDQIKVVAVTCLGITSPL
LVNKRFDVCIMDEAGQTTLPVSLGPLMYASKFVLVGDHYQLPPLVQSTEGLENGMGVSLF
CRLSEAHPQAISALQSQYRMCADIMELSNALIYGNRLHCGSSEVENAKLKYTSSKYVSTW
LKEVLDPNRPVIFIDTDMVPALEAKDGKTVNNPIEANIIAKITEELVTKGIEVEDIGIIT
PYNSQTNLIRHVVSTSVEIHTIDKYQGRDKDCILVSFVRSNESPRNCISSLLGDWHRVNV
ALTRAKKKLIMVGSCQTLSKVPLLKLLIEKIDEQSGIFSVSKKDINLRELKRCSQMR
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atgcctccgaagaagaaactcaactctgcctccaagaaatcgaatcaaaactcccagcct
tccaagttcggaatccagcacttcttccaccgccacaccctcacccaaaaccaccctaaa
acccaacaaacaccagatcccaatactaataagcttcaaatacctacaaatgggtctctt
cctcccgaaaagagtggtccgattgccgcactttcagccgccccaaactctaaaaaaatc
gcactcgattcagcagttcggaaccctacgaatgattcgcggacaactgagacgacgaat
tcgcagaatactcctcccgagaatctcttaccggcagctgttaacgccggggaaaatcaa
tccgaggtgtcccctgagatttgcaagtcggtgtctgtcaagcgcttcaagttttcgcct
ggaatgttgatcaagcagagccaggatgatggaggtgatgagataacctggaaaatttct
cctgttaatgatcgactccatgcggtatcaaagcatttacctgatatggtcaaagtgtta
gcagaatcttcaaggatcaactctttagatttccatcactgccagctgaataagagttct
cccagatcacccggtaagattgagaagtggctttcttcgcctccgctgaagtcaacagag
aaatcctcgttatccacaaatggggttagcttgaaaaggtttaatccaaatcttgatata
ggcttccatcgaagccaagaaaattcaaatgataacagcaacacctgtgtaactaatagc
ccgagtcctttcaagactccaccatctctttcatattgccatgataagcctgatgatgga
gccggtccgcatgaaacaactgatcagctggattcaaggcaacacaaaaaggcattgctc
gaacttttagaccaagtggaaggtgtactttcagttgatgagtccgaaagtaagggtatg
gagacatgcatagctgaagttcaggctggaaatagtggtgagaaatttgtcaaagctcat
cctgttgtgaatagcttggtgactaatctgccgagaaatgtcaaaagggaaatctccaat
atttattgtcttgtattggaggtttctgagaaacgtggaactgttaattcatctggttcc
caatgcccttttaaggttcttcgcttattgaacgagcaaagtggagaagaacgggttgtc
catttgtgggatgagtgggtttatagtgtcattgcacctggggatacaattcatgtcatt
ggcaaatttgatggccaagggaaatgcgatgtaaatcgtgaccagaattatataattgtt
cacccagaggttttggtgtctggaacacgggttgctgccagtttcagttgtcctaggcgg
acggtcctagatgagaggctaaaatgcagcgagcaatcagttgcagcattgactggcacc
ttgttgcatcagatttttcaggctggattaacaagggaagatctaacaaaagagttcttg
gaggaatatgcaagaatggtgctccagaaaaatattgagagcctgtatgcatgcggagtg
aatgaatatgaaatgcacaagacgttgattgagggaattccaaggatgttaaattggata
ctcctcttccgagaaacacaggattcaaaacttcctagtgttgattttggatctaatggg
ggactgaagaaggttagagtaactgaggtagtggacattgaagagatggcatgggcccca
aaatatggcctgaaagggatgattgatgcatctattcaagttgaagtcacttcgagtgcc
catgaagtttatgagaagataatgcctttcgaatttaaaactgggaaaggaactagtggc
cagtcagctatggaacacagcgcgcaagtgatgttgtatacactccttatgtctgagaga
tacctgaagactattgattgcggtcttctatactatctccacacagatcggacacagggg
attgcggtaagaagatccgacttggttgggctgatcatgcgtcgcaatgaacttgcaagt
gatattctcaaggcatcaacatctcaacaattgccaccaatgttacagagcccaagcatg
tgcaaaggttgccgccacctaaatgcctgtactgtctaccataaggcccaaggtggaagc
accaaggatagtggattgggtgacatgtttgtttcacttgtgagccatttgacaagtagg
cattgtgctttccttcggcgatgggagcagttaattgatttagaagctaaggaaatacag
aatgctaagaaagatatctggtggtcatctaattcaaggcatgaaaagtcaagtagttgc
ctttcttctgtcattcttgatacttcggatgaaatcccacagacaaagttctctaagggc
aaccgatttatatatcgctttgtgcgccaagaattgcctcaacttggtggtgtagcacgt
aatggagactctctgagtactggatcttctcctgttgatggcagtaattgctctcttaga
agtggagactatgtgatactgagtacggaagatggccgattaacagtggcaagtgggata
ataatggacatcagtcgctccaatgttactgtttccttttcgaagcgcttaaggcttcca
gggagcagcccttcttctatggcacaggatctccatcatgaagtctggcgcattgacaag
gatgaagccatgacatcatttgcaatcatgaggttcaatcttatacaacttttcctgcaa
aatgagcatagttttcatcaaagaaggatgattgttgaccttgaggctcctagattcgat
agtggatgtatatttagtcaagaccctgcaatatcgtatatctggtctgagaaaaatttg
aataatgatcagcgcagagccataatcaagatacttacagcaaaggactatgcactaatt
ctggggatgcctggaactggcaaaacatccactatggtgcatgcagtcaaggcactgttg
atgagaggagcatctattttgcttacgtcatacacaaactcagctgtcgataatttactt
ctcaaattgaaagctcagggcatagattttgtacgcataggaagaaatgatgcggtgcat
gaggagattcgtgggcattgcttttcagctatggacatacatagcactgaagaaattaag
gtaagactagaccagatcaaagttgttgcagttacatgtttggggataactagtcctttg
cttgtcaacaagagatttgatgtttgcatcatggatgaagctggacaaaccacactcccg
gtatccctggggcccttgatgtatgcatccaaatttgtcctcgttggagatcattatcag
ttaccaccacttgtccagagcaccgagggtttagagaatggaatgggcgtaagcttgttt
tgcaggctttcagaagcgcatccccaggctatttcagcattgcaaagccagtatcgtatg
tgtgcagacattatggaactatccaatgcattgatatatggtaacagattgcattgtggt
tcttcggaagtagagaatgccaaacttaagtacaccagttctaagtatgtttcaacatgg
ctaaaggaggttttggatccaaatcgaccagtaatatttattgatacagatatggtgcct
gctctcgaggcaaaagatgggaagaccgtaaataacccaattgaagccaacattattgcc
aagattacggaggaattggttaccaaaggcattgaagttgaagacattggcatcatcacc
ccctataactctcagacaaatctcatccgccatgttgtttccacatctgtggagatacat
accattgataagtaccagggaagagataaagactgcatcttggtctccttcgtaagatca
aatgaaagtccaagaaactgcatttcttctcttcttggagactggcacagggttaatgtt
gctctgacacgtgccaagaagaaattgataatggtggggtcgtgccagacactttctaag
gttccactcttaaaacttcttattgagaagattgatgagcaatcgggcatatttagtgtg
tccaagaaggatatcaacctcagagagctaaagagatgctctcaaatgaggtga
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