Rhododendron vialii: 131319074
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Entry
131319074 CDS
T09330
Name
(RefSeq) uncharacterized protein LOC131319074
KO
K13100
pre-mRNA-splicing factor CWC22
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rvl03041
]
131319074
Spliceosome [BR:
rvl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
131319074
Complex C
U4/U6.U5 tri-SnRNP related factors
131319074
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MA3
MIF4G
Motif
Other DBs
NCBI-GeneID:
131319074
NCBI-ProteinID:
XP_058205168
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All DBs
Position
1a:complement(36683105..36690152)
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AA seq
939 aa
AA seq
DB search
MVRKHRSDSSDDEDDTERNHSSWRTRRKSNSSDSDENDRTRDADASKRKTDHDRERKDSH
RWSGKRGKQDEEINDRYDKYEKGSVREYGRVERERGKQDEERSDRFNYEKGSVERGRGKR
DRERGDGFEDRGRERHSVRDDDRDKNGDRRIEDGEIFEGKGMGVKKGFEEDRDDRIRSDD
RDRKHGREKGGLEEGEVKGHRGREVVDDDDDNNRVRGRSGRDDRDRKHGRENGGHEDFKV
MRQRDKKGNDEDRDDRRRSERDDRGARDRKHRRVKGGHEDFEDKEHRGRDVVDDDDDDDD
DDDRDQKRIRSERDDGDRKHKRDKGGDGGREYDRSLREKEERDGKKANGDQKVQNPILLQ
GGNLNVEPANLGRSGGVYIPPFKLARMMKEVEDKSSVEYQRLTWDALRKSINGLVNKVNA
TNVKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLR
RIILQLKRAYKRNDKPQLLAAVKFIAHLVNQQVVHELVALELLTLLLDKPTDDSVEVAVG
FVTECGSILQDLCPRGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGYPAVRP
ELDLVEQEDQLTHEISLQEEEMDPETTLDIFKLDTQFIENEKRYEEVKKAILGDESEDEA
DSDAGSEDEDDEESDEEDEEQMEIKDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIK
LEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKIHQENFEKCFVQQYSMIHRLE
TNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLN
ERLSDPAMQDSFESIFPKDNPKNTRFSINFFTSIGLGGITENLREYLKNMPRLIMQQQKP
DDSGSSDSSESDASTAESDSESSSSDESDDRRRKRKRRG
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgcaagcacaggagcgactccagtgacgacgaagacgacactgaaaggaaccat
tcgagctggagaactcgccgcaagagcaattcatctgattcggacgagaacgaccgaact
agggacgccgacgccagcaaacggaaaaccgaccatgaccgagagcgcaaggactctcat
cgatggtccggcaaaagaggtaagcaagacgaagagataaacgataggtatgataagtac
gaaaagggttcggttagggagtatgggagggttgagagagaaaggggcaagcaagacgaa
gagagaagtgataggtttaactacgaaaagggttcggttgagagaggacggggtaagcgc
gatagagagagaggggatgggtttgaggatagaggaagagagcggcattcggttcgagac
gatgatagagataagaatggagataggaggatagaagatggggagatttttgaaggtaag
gggatgggggttaagaaagggtttgaggaggatagggatgataggataagaagtgatgat
agagatagaaagcacgggagggagaagggcgggcttgaggagggagaagttaagggacat
agaggtagggaagtggttgacgacgatgatgataacaatagggttaggggaagaagtggg
agggatgatagggatagaaagcacgggagggagaatggggggcatgaggatttcaaagtt
atgagacagagggataaaaaagggaatgacgaggatagagatgataggagaagaagtgaa
agggatgataggggtgccagggatagaaagcacaggagggtgaagggtgggcatgaggat
ttcgaagataaggaacatagaggtagagacgtggttgatgatgatgatgatgatgatgat
gatgatgatagagatcagaagaggataagaagtgaaagggatgatggggatagaaagcac
aagagagacaagggtggagatgggggaagagaatatgataggagtttgagggagaaggag
gagagagacgggaaaaaggcaaatggagatcaaaaggtgcaaaaccctattttgttgcaa
ggaggaaacttgaatgtggaaccggcgaatttggggaggagtgggggagtttacattccg
cctttcaagctagcgcggatgatgaaagaggtggaagataagagtagtgtggagtaccag
aggttgacgtgggatgctctgaggaagagtataaatgggttggtgaataaggtgaatgca
accaacgttaagaacataattcctgaacttttcgcggagaacttgattcgtggtagaggc
ttgttttgtcggtcatgtatgaagtctcagatggcctcaccgggattcacagacgtgttt
gctgcgttggttgctgtggtgaatacaaagtttccggaagtgggtgatcttttgttgagg
aggataatattgcagctcaaacgagcttacaaacgcaatgacaagccacaattactagca
gctgttaaattcatagcacatctagtgaaccagcaagtggttcacgagcttgtggctctg
gagctgctcacacttttgttggacaaacctactgatgacagcgtggaggtagcagtgggt
ttcgtgacagaatgtgggtcaattcttcaagacctttgccctcgaggcttgcatggtata
tttgagcgttttcgtgggattcttcacgaaggagaaatagacaagagagttcaatttttg
atcgaaggtttatttgcaataaggaaagcaaaatttcaggggtaccctgctgttcgtcct
gagttggaccttgtcgagcaagaagatcagctcacacacgaaatatctcttcaggaagag
gaaatggacccagaaactactctagatatattcaagctggatacacagtttatcgagaac
gagaaacgatatgaagaagtgaaaaaggccatccttggcgacgagtctgaagatgaagca
gattcagatgctggctcggaagacgaggatgatgaagaatccgacgaagaggacgaggag
cagatggaaataaaagatgagacagagacaaatcttgtaaaccttcggaggacaatctat
ctgacaattatgtctagtgtagattttgaggaagctggccacaaactattgaagattaaa
cttgagcctggtcaagagatggaactgtgcatcatgcttttggaatgctgcagtcaagag
agaacgtatctgcggtattatggccttctggggcagcggttctgcatgatcaacaagatc
caccaggaaaattttgagaaatgctttgtgcaacagtattccatgattcatcgccttgag
acgaataagctgcgtaatgtggccaagttttttgctcatttacttggcacggatgctctt
ccttggcacgttctagcttatatacggttgactgaagaggatactacctcatcttcccgt
attttcattaagattctctttcaggaattgtcagagcaccttggcattcgcctgttgaac
gagcgtctctctgatcccgcgatgcaggactcttttgagtcgattttcccgaaggataat
cccaagaacacaagattttccatcaatttcttcacttctattggacttggtggaattaca
gagaacctgcgtgaatatttaaagaacatgccccgtctaatcatgcaacagcagaaacca
gatgattctgggagttccgattcttccgagtcagatgcttcaactgccgagtcagactct
gagtcatcaagctccgatgagagtgacgacagacgaaggaagcggaagaggagagggtga
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