Rhododendron vialii: 131319116
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Entry
131319116 CDS
T09330
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rvl
Rhododendron vialii
Pathway
rvl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131319116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131319116
03110 Chaperones and folding catalysts [BR:
rvl03110
]
131319116
03029 Mitochondrial biogenesis [BR:
rvl03029
]
131319116
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rvl04147
]
131319116
Enzymes [BR:
rvl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
131319116
Messenger RNA biogenesis [BR:
rvl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
131319116
Chaperones and folding catalysts [BR:
rvl03110
]
Heat shock proteins
HSP60 / Chaperonin
131319116
Mitochondrial biogenesis [BR:
rvl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
131319116
Exosome [BR:
rvl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
131319116
Exosomal proteins of other body fluids (saliva and urine)
131319116
Exosomal proteins of breast cancer cells
131319116
Exosomal proteins of colorectal cancer cells
131319116
Exosomal proteins of bladder cancer cells
131319116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
131319116
NCBI-ProteinID:
XP_058205587
LinkDB
All DBs
Position
1a:complement(40323071..40328185)
Genome browser
AA seq
591 aa
AA seq
DB search
MASANAISTASVLASPKQGSLRGKRVVSQWQGQRVNYNNRRSSSSRLVVRAAAKDIAFDQ
ASRAALQAGIDKLADAVGLTLGPRGRNVVLDEFGTPKVVNDGVTIARAIELPDAMENAGA
ALIREVASKTNDSAGDGTTTASVLAREIIKLGLLNVTSGANPVSIKKGIDKTVQGLIVEL
EKRARPVKGREDIKAIASISAGNDEIIGTMIADAIDKVGPDGVLSIESSSSFETTVDVEE
GMEIDRGYISPQFVTNPEKLTVEFENARVLVTDQKIASIKDIIPLLEKTTQLRAPLLIIA
EDITGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQASDLGLLIEN
TTVEQLGLARKVTISKDSTTIIADSASKDEIQARISQIKKELSETDSVYDTEKLAERIAK
LSGGVAVIKVGAATETELEDRKLRVEDAKNATFAAIEEGIVPGGGAALVHLSTCVPAIKE
TLVDADERLGADIVQKALVAPAALIAQNAGVEGEVVVDKIKASEWEVGYNAMIDKYENLV
ESGVIDPAKVTRCALQNSASVAGMVLTTQAIVVEKPKPKTPMAAPPQGLTV
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcaaatgccatctccaccgcctcagtcctcgcttctcctaaacaagggagt
ttgaggggtaagagagtggtgagccaatggcaggggcagagggtgaattacaacaacagg
aggtcgtcgtcttcgaggttggtggttagagctgctgctaaggatatcgcattcgaccag
gcctcgagggcggcgctccaggccggcatcgataagcttgctgatgccgtcggcctcacc
cttggccctagggggaggaatgtagtcttggatgaatttgggaccccaaaagtagttaac
gatggggtgaccattgctagagccattgagctacctgatgcgatggaaaacgctggtgct
gctctaattagggaggttgcaagcaagaccaacgattccgctggcgatgggactacaact
gcatcagttcttgctcgtgaaattattaaattgggcttactaaatgtaacctctggtgct
aatccagtttcaataaagaaagggattgataaaactgttcaggggttgattgttgagttg
gagaagagagctaggcctgtcaaaggccgcgaggacattaaagccattgcgtctatatct
gctggaaatgatgagattatcgggaccatgattgctgatgcaattgacaaggttggacct
gatggtgttctgtctatagagtcatcctcctcttttgagacaactgttgatgtggaagaa
gggatggagatcgacaggggttacatctccccgcaatttgtaaccaatcctgagaagttg
actgttgaattcgaaaatgcaagagtactggttacagatcagaagatcgcatcaataaag
gatataattcccttgctcgagaagacaactcaattgcgagcccctttgcttatcattgcc
gaagatatcactggtgaggctcttgcgactcttgtcgtgaacaagctgagaggcatcctg
aatgtcgctgccatcaaagcaccaggttttggtgagaggaggaaggcacttcttcaagat
attgctattgtgacaggagctgagttccaagcttctgacctgggtttgcttattgagaac
accacggttgagcagcttggtttggcacgaaaagtgaccatctcaaaggactccactacc
ataattgcggattctgcatcgaaagatgagatacaggctaggatttcacagattaaaaag
gagttgtcggagacagattctgtgtatgacacggagaaactcgctgagagaattgccaaa
ttatcagggggtgttgctgtcattaaagtgggtgctgcgacggagactgaacttgaagac
cgtaagctgcgtgttgaggatgccaagaatgcaacttttgcagctatagaggaagggatt
gttcctggcggtggcgctgcattagttcatctctcaacttgtgtgcctgccattaaggaa
acactggttgatgcggatgaaaggcttggtgctgacattgtgcagaaggccctggttgca
cccgcagctttaatagctcagaatgctggcgttgaaggtgaggtggttgtggataagata
aaggctagtgaatgggaggtgggatacaatgcaatgatagacaaatatgagaacctggtg
gaatccggagttatcgacccagcaaaggtgacaagatgtgctttgcagaattcggcttca
gttgcaggaatggtgcttacgactcaagccatcgtcgtggagaagcccaagcccaagacc
ccaatggctgctcccccgcaaggccttactgtgtga
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