Rhododendron vialii: 131319201
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Entry
131319201 CDS
T09330
Name
(RefSeq) structural maintenance of chromosomes protein 6B
KO
K22804
structural maintenance of chromosomes protein 6
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rvl03400
]
131319201
DNA repair and recombination proteins [BR:
rvl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
131319201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_29
SbcC_Walker_B
Laminin_II
AAA_21
Baculo_PEP_C
ABC_tran
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
131319201
NCBI-ProteinID:
XP_058205342
LinkDB
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Position
3a:26372865..26396964
Genome browser
AA seq
1058 aa
AA seq
DB search
MEDSRACTGPTGDPYHSQAGIISKIRLENFMCHSNLEIEFGDSINFVTGQNGSGKSAILT
ALCVAFGCRAKGTQRAATLKDFIKTGCSYAVVDLQIKNQGDDAFKPDLYGDMIIIERRIS
ETTSSLVLKNQQGRKVASRREDLRELVEHFNIDVENPCVIMSQDKSREFLHSGNDKDKFK
FYFKATLLHQVDELLKSISSQLVDANEVVNELESSIRPVEKELKELQEKIKNMEHIEEIS
QKVQLLKKRLAWSWVYDVDKQLQEQSEKIETLKSRIPKCQDRIDRQIGKIEELRGHLTKK
KAQIASMMERTSEVRRMKDELQQSLSLATKERLELEGDHGRKINLIQKMVNRVKLLEQQI
HDIHEEHTKNTQAEEFEIEERLKELQDEFNAANLSLSRLKEEEEALLDSLSVQKDELEKI
AREIADNEKKHREIRSSIRDLRLNQSNKVTAFGGFRVTALLQAIERHHHRFKRPPIGPIG
AHVSLVHGDMWAVAVESAIGKLLNAFIVTDHKDSVLLRGCAKEAGYNHLQIVIYDFARPR
LSIPNHMLPQTNHPTTISCLHSDNPTVMNVLVDQGNAERQVLVRNYDVGKAVTFEQRIAN
LKEVFTSDGFKMFSRANAQTILPPNKKGRASRLCGSYDNQIKNLERDALSAQEQAQQCRG
KKRKVEEGLQDLNNKLQSAKRRCWETERLVAQKKYALQDVKNSQVTEAGSAPASNVDELL
HEISKIQEDLQENEMLVEVIRVRMKEADAKASDLKASFENLCESAKGEIDAFEEEERELI
LIEEDLHSKEAEKIHYEKVMNNKVLPEIKTAEAQYEELKNLRVESYRKASIICPESDLEA
LEGCEASTPEQLSDLLSRLNRTLQRESDRYDESIEDLRMLHQKKERKILRKQQTYKALRE
KLNACQKALNLRLRKFERNASDLKRQLTWKFNGHLKNKGISGLVKVNYAEEKLSIEVKMP
QDASSNNVRDTRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTL
VDFALAQGSQWIFITPHDISMVKQGERIKKQQMAAPRT
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggaagattctagggcttgcacgggaccaaccggcgacccgtaccactctcaagcgggg
atcatctcgaagatccgtctggagaacttcatgtgtcacagtaacttggaaatcgagttt
ggagactcgatcaacttcgtcactggccaaaacggaagtggaaagagtgcgatactcacc
gcgctgtgtgttgcttttgggtgtcgagccaaaggcacgcagcgggcggccacattgaaa
gatttcataaagacgggatgcagctatgctgttgttgatcttcaaattaaaaatcaaggc
gatgatgcttttaagccagatttatatggtgacatgataataatagaacgccggatttcg
gagacgacaagttctcttgtcttgaagaatcagcaaggaagaaaggtagctagtcgcagg
gaggatctacgtgagcttgtggaacattttaatattgatgtcgagaatccatgtgtaatt
atgagtcaagacaaaagcagagaatttttgcattcggggaatgacaaagataaattcaag
ttctacttcaaggctacactgcttcatcaagtggatgagctcttgaagagtatcagtagt
cagctggttgatgcaaatgaagttgttaatgagctggaatcctcaataagaccagttgaa
aaagaacttaaggagttgcaagaaaaaattaaaaacatggagcacatagaagaaatatct
caaaaggtgcagctgttaaagaagaggcttgcatggtcatgggtttatgatgtggacaag
cagcttcaggaacaaagtgaaaagattgagactctgaaaagccgtatacctaagtgccaa
gaccggattgatagacaaattggtaagattgaagaattgaggggtcatctgacaaaaaag
aaagctcaaattgccagcatgatggagaggacatcagaagtgaggaggatgaaagatgaa
ttgcagcagagtctctctctggctacgaaagaacgacttgagctggaaggagatcatggc
cggaagataaacttaatccagaagatggtgaatcgggtgaagttgcttgagcagcaaatt
catgatattcatgaggagcatacgaagaatacgcaggctgaggaatttgagattgaggaa
aggctcaaggaacttcaagatgagttcaatgcggctaatttatcattatcaagattgaag
gaagaagaggaggccttattggatagcctatctgttcaaaaggatgaattagaaaagatt
gctcgtgagattgctgacaatgaaaagaagcatcgcgagattagatcaagcatccgtgat
ctccgattgaatcagtccaataaggtaacagcttttggaggatttagagtgactgctctg
ttacaggcaatagagagacatcatcatagattcaaaagaccacccattggtcccattggt
gcccatgtgtctttggtacatggcgacatgtgggctgttgctgtagaaagtgcaataggc
aaattgctcaatgcttttattgtgacagatcataaggattctgttcttttgagaggatgt
gcaaaggaagcagggtacaaccaccttcagattgttatatatgacttcgctagaccaagg
ttgtccattccaaatcacatgcttccccagacgaatcatcctactactatttcttgctta
cattctgataatccgactgttatgaatgtcctggtggatcagggcaatgcagagcgacaa
gtgctcgtcagaaattatgatgtggggaaagcagttacttttgaacaaagaattgcaaat
ttgaaggaagttttcacgtcagatggattcaaaatgttttcccgtgctaatgctcaaacc
attctccctccaaataagaagggtagagctagtcgcctttgtggttcgtatgataatcaa
ataaagaatctagaaagggatgcattaagtgcacaagaacaagctcaacaatgccgtggg
aaaaagaggaaagtagaagagggacttcaggacctcaataataaacttcaaagtgctaag
aggaggtgttgggagacagagcgccttgtggcgcaaaagaaatatgcacttcaagatgtg
aagaattcacaggtcacagaagctggttcagcacctgcttctaatgttgatgagcttctt
cacgagatctctaaaatccaagaagaccttcaggagaacgaaatgttggtagaagtaatc
cgtgtgagaatgaaggaagcagatgctaaagccagtgaccttaaagcttcatttgagaac
ttatgtgaatcagcaaaaggagaaattgatgcctttgaggaagaagagcgcgagctcatt
ctaattgaagaagatctacattctaaagaagcggagaagattcattatgagaaagtgatg
aataacaaggtcctccctgaaatcaaaacggcagaggcacaatatgaggagctcaaaaac
ttacgcgtggagagttacagaaaggcttctattatttgtcctgaaagtgatcttgaagct
ttagaaggctgtgaagcgagtaccccagaacaacttagtgatctcttaagtaggctaaat
cggacacttcagcgtgagagtgacaggtatgatgagtctattgaggatctcagaatgttg
catcagaagaaggagcggaaaatacttagaaagcagcaaacttataaggctttacgagag
aaactgaatgcatgccagaaggccttaaacttgagattgcgcaagtttgagagaaatgcg
agtgatctgaagcgccagttgacgtggaaatttaatgggcatttgaaaaataaaggaatt
agcggtctcgtgaaagtcaattatgcagaggagaaactttcgatagaggtgaagatgccc
caagatgcatcaagtaacaatgttcgtgacactagagggctctcaggtggggagcgttct
ttctcaacattatgctttgcactagctctgcatgaaatgacggaagccccctttcgagcg
atggacgaatttgatgtcttcatggatgcagttagccggaaaatcagcttggacactctt
gtggattttgctttggcacagggatcccagtggatatttattacccctcacgatatcagc
atggtaaaacaaggggagaggattaagaagcagcaaatggcggcccctcggacatga
DBGET
integrated database retrieval system
