KEGG   Rhododendron vialii: 131319222
Entry
131319222         CDS       T09330                                 
Name
(RefSeq) RNA-binding protein Y14A-like
  KO
K12876  RNA-binding protein 8A
Organism
rvl  Rhododendron vialii
Pathway
rvl03013  Nucleocytoplasmic transport
rvl03015  mRNA surveillance pathway
rvl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131319222
  09122 Translation
   03013 Nucleocytoplasmic transport
    131319222
   03015 mRNA surveillance pathway
    131319222
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rvl03019]
    131319222
   03041 Spliceosome [BR:rvl03041]
    131319222
Messenger RNA biogenesis [BR:rvl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     131319222
Spliceosome [BR:rvl03041]
 Complex C
  Other components
   EJC/TREX
    131319222
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5 RRM_7
Other DBs
NCBI-GeneID: 131319222
NCBI-ProteinID: XP_058205365
LinkDB
Position
3a:3518661..3523422
AA seq 146 aa
MASYVEPLDVEVELLNDDRMEEYSDPLPPRIVYGAPQRSIDGWIILVTGVHVEAQEDDIH
NAFADFGEVKNLHLNLDRRSGFAKGYALIEYEEFQPAKDAISTMNGAELLTQTIFVDWAF
SKGHNKQRSFGRPPHPRRSRSPRRRH
NT seq 441 nt   +upstreamnt  +downstreamnt
atggcttcgtacgtcgaaccattggacgtggaggtggagcttctaaacgacgaccgaatg
gaggaatactctgaccccttgccgcccagaatcgtttacggagccccccaacgatctatt
gatggttggatcatcttggttactggagttcatgttgaggcacaagaggatgatatccat
aatgcttttgctgattttggagaggtcaaaaatttacatctcaatcttgatcgtcgctct
ggttttgccaagggctatgcactgatcgaatacgaggaattccaaccagctaaggatgca
atatccaccatgaatggggctgaacttttaacccaaaccatctttgttgattgggccttc
agcaagggccacaacaaacagagaagttttggaaggccaccgcatcctcgccgttccagg
agtccacggaggagacactga

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