Rhododendron vialii: 131319337
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Entry
131319337 CDS
T09330
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rvl03009
]
131319337
03036 Chromosome and associated proteins [BR:
rvl03036
]
131319337
Enzymes [BR:
rvl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131319337
Ribosome biogenesis [BR:
rvl03009
]
Eukaryotic type
Pre-60S particles
Helicases
131319337
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
131319337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
FlpD
CMS1
Motif
Other DBs
NCBI-GeneID:
131319337
NCBI-ProteinID:
XP_058205526
LinkDB
All DBs
Position
3a:27136113..27144399
Genome browser
AA seq
703 aa
AA seq
DB search
MPSLALSEPVSSQSPKVKKKKMKADANVETLELDSSTVKKAKKEKKAKKSKASDSDSEEF
NLNSKKKDKKRKAADIDEEEEEERSEASSELIEPVNSSKKKKVKLVEAVDDVEEGEEMEN
PNSVSKFRISAPLREMLKSKGIEALFPIQAMTFDIVLDGSDIVGRARTGQGKTLAFVLPL
LESLTNGPTKAARKTGYGKAPSVLVLLPTRELAKQVSADFEVYGGALGLTSCCLYGGAPY
QSQQIKLKRGVDIVVGTPGRIKDHIERGNIDLSSLKFRVLDEADEMLRMGFVEDVELILG
KVEDVSKVQTLLFSATLPTWVKNIAARFLKPNKKTVDLVGNEKMKASTNVRHITIPCSSS
ARSQLIPDIIRCYSSGGRTIIFTETKDCASELADILPGARPLHGDIQQAQREVTLSGFRS
GKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRR
SNFAKIERESGVKFEHISAPQPADIAKAAGSEAAETITQVTDGVIPIFKSAAEELINASG
LSPVELLAKALAWTAGYTEIKSRSLLTSMENHVTVHLEAGRPIYTPSFAYAVLRRFLPEE
KVELVKGFSLTADGKGAVFDVPTEELDTFLAGQEKAGGVSLEVVKELPQLQEKEARVGRF
SNSGRGGGGGRFSGGRGGGFSDRRSGGFSRGSGGGRGRSNNKW
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgccttctctcgctctctccgaacctgtatcctcccagtcccccaaagtcaagaagaag
aagatgaaggccgacgcgaacgtcgaaaccctagaactcgactcctcgaccgttaagaag
gccaagaaggagaagaaagcgaagaagtcgaaggcctccgattccgattcggaagaattc
aacttgaacagcaagaagaaagataagaagcggaaggcggccgatatcgacgaggaggag
gaggaggagaggagcgaagcaagctcggaattgatcgagccggtgaattcgagtaagaag
aagaaggtgaagctggtggaggctgtcgatgacgtggaggagggggaggaaatggagaat
ccgaattcggtgtcgaagtttaggatttcggcgccgctgcgggagatgttgaagtcgaag
gggattgaagcgttgttccctatacaagccatgacttttgatatcgtcctggacgggtcg
gacatcgtgggccgggcacgcaccggtcagggtaaaacactagcctttgtgttgccatta
ttggaatctttaacaaatgggcctacaaaagcagcaagaaaaactggatatgggaaggca
ccaagtgttcttgtgcttttacctacaagggaattggccaaacaggtgtctgcggacttt
gaagtttatggtggggccttgggattgacctcatgctgtttatatggcggagctccttac
caaagtcaacagattaaactgaaaagaggggttgatatagttgtggggacacctggccga
attaaggatcacatagagaggggaaatattgatctgagctcactgaagttccgtgtgctc
gatgaagctgatgaaatgctaaggatgggttttgttgaagatgttgagcttattctaggt
aaggtggaggacgtgagcaaagttcagacacttctattcagtgccactttaccaacctgg
gttaagaatattgctgctaggtttctcaaacccaataaaaaaactgttgatcttgttggt
aatgaaaagatgaaggctagtaccaatgtgaggcatataactattccctgctcaagttct
gccagatctcaacttattcctgatattattcgctgctatagcagtggtgggcgtactatc
attttcactgagacgaaggattgtgcttctgaacttgctgacattttgcctggagcacgt
cctttacatggggacatacaacaagctcagagggaggttactctttctggcttcagatca
ggaaagttcatgacattagtggcaacaaatgtggcagcaagggggttggacatcaacgat
gttcagttaatcatccagtgcgagcctccacgtgatgtagaagcatatattcatcgatct
ggacggacgggtagagctggaaatactggggttgcagtgatgctttatgacccaagacgt
tcaaattttgccaagatagaaagagaatctggggttaagtttgagcacatatctgctcct
cagccagctgatattgccaaggctgctggatcagaagcagcagaaacaatcacccaagta
accgatggtgtcattcccatcttcaaatctgctgctgaggagctaataaatgcttctggt
ctatcaccggtagaactgcttgcaaaagcacttgcctggactgctggttatacagagatc
aagagtagatcacttcttacttccatggagaaccatgtcactgtacatcttgaggctgga
agacccatatacacaccatcgtttgcttatgctgtcttgaggaggtttttacctgaggag
aaagtggagctggtgaagggtttctctctaacagctgatggaaagggggcggtattcgat
gtgcctactgaagagttggacacatttcttgctggccaggaaaaggcaggtggtgtgagt
ttagaggtggtgaaagagttgcctcaattgcaagagaaagaagcaagagtgggaagattt
agcaatagtgggcgtggcggcgggggtgggaggttttcaggaggaagaggaggtggtttc
tctgatcgaagaagcggtgggttttccagaggctccggtggcgggaggggtcgcagcaac
aacaaatggtga
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