Rhododendron vialii: 131319556
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Entry
131319556 CDS
T09330
Name
(RefSeq) peroxisome biogenesis factor 10 isoform X1
KO
K13346
peroxin-10
Organism
rvl
Rhododendron vialii
Pathway
rvl04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
131319556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rvl04121
]
131319556
Ubiquitin system [BR:
rvl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
131319556
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
zf-rbx1
RING_XB3-XBAT31
zf-RING_5
Prok-RING_4
U-box
zf-ANAPC11
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
131319556
NCBI-ProteinID:
XP_058205844
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Position
3a:4481245..4488524
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AA seq
405 aa
AA seq
DB search
MGMVWKEPSGSGDASGNSSEELSSSSRSAQQGGGVRRFPTAAQPEIMRAAEKDDQYASFV
YDACRDAFRHLFGTRVAVAYQSETKLLGQMLYYVLTTGSGQQTLGEEYCDIIQVAGPYGL
PPTPARRALFMVYQTAVPYIAERISSRVASRGITLSDSLSDDLYGDNVSERNQDQSPTVA
ELTSSSASEAPVSALSRWKLKINGLWLYAARTWPSMLPLAREFLQVVLRTNLMFFYFEGL
YYHISKRAAGIRYLFIGKQVNQRPRYQILGVFLLIQLCIIAAECLRRTNLSSIASSVHQT
SLGTYQASAGRGIPVLNEGGNLVTGDSDMGSWVSDSKPTSESHATSGVGKCTLCLSNRQY
PTATPCGHVFCWNCIMEWCNEKPECPLCRSPLTHSSLVCLYHSDF
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggggatggtttggaaagagccatcaggctcaggcgatgccagcggcaacagcagcgag
gagctatcaagttccagcagatccgcccaacaaggcggtggcgttaggcggttcccaacg
gcggcgcaaccggagataatgagagcagccgagaaggacgaccagtacgcctccttcgtc
tacgacgcctgtcgcgacgcctttcgccatttattcggtactcgagttgctgttgcctat
cagagtgagacaaaacttctgggccaaatgctatattatgtacttacaactggttcaggg
cagcaaacacttggagaagaatattgtgacatcattcaggttgctggaccatatggactt
cctccaacacctgccagacgtgctttgttcatggtttaccagactgcagttccttacata
gctgaaagaattagttctagagttgcttcccgtggcattaccctctcggattcactatct
gatgatctatatggtgacaatgtttccgagagaaatcaagatcaatcacctacagtagct
gaactcacatcttcctctgcttcagaagcacctgtttcagctttgtctagatggaaacta
aaaattaatggattatggctatatgcagctcggacatggccctcgatgcttcccttggct
cgtgaatttttgcaagtggttcttcgcaccaaccttatgttcttctactttgaaggcctg
tattatcacatatcaaaacgtgcagcgggcattcgttacttgttcattggcaaacaagtg
aaccaaagaccaagataccaaatattgggggtctttcttttaattcaactctgcatcatt
gctgctgaatgcctacgacgtaccaatttatcttccattgctagttcagttcaccaaaca
tccctagggacataccaggcttcagcagggcgaggcataccagttttaaatgaaggtggc
aatttggtaactggggactctgatatgggaagttgggtctctgattccaaaccaacttca
gagtctcatgcaacaagcggagtcggcaaatgtacgctttgccttagcaatcgccaatac
ccaacagccacaccttgtggtcatgtattttgctggaattgtattatggagtggtgcaat
gaaaaacctgaatgccctctgtgccgttctcctctgactcattcaagtctagtttgttta
tatcattcagatttctag
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