Rhododendron vialii: 131319731
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Entry
131319731 CDS
T09330
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rvl03021
]
131319731
Transcription machinery [BR:
rvl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
131319731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
131319731
NCBI-ProteinID:
XP_058206109
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Position
3a:29547494..29552246
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AA seq
512 aa
AA seq
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MGVVTVSSSASRTPLGLSATFSSYRSPSERPLILAFKTVKTKNNALVAPAELVSIPAETP
KENKKKLRRSRKASERLKALSIDEVPSCTFEVDYNEAAAKLESLYKLSPTSHPSDVDDTD
HVVRRGGRRRTKEVGDEEYKIGSNVVRSGRKFPIRLNLAGRISLRNKNDCEMACSVRRRK
DPKNEEDRIRKLIREYSVSSELVSYDWKKMKIPPVLPSSEHSFLFKLMQPMKEILEVKGN
LEQDLGQEPRNGDLAEAMKMTVVQLRKTLVVGQAARNKLVKHNLRLVLFVVKKYFREFAN
GPEFSDLCQAGVNGLITAIDRFEPKRKFRLSTYGLFWIRHAIIRSLTVSSFLHVPFGLES
VRVEIQRAKLELSFELNRLPTEEEIIKKVGISPSRYHEVMRASKPVSSLNAKHRTTQQEL
IDGLADTEGVGGDERQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNL
NISREMVRKHEMKAMMKLKHPARVDYLRHYAF
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtaactgtttctagctcagcttcgaggacaccattgggattaagtgcgact
ttctcatcttacagatccccatcagaaagacctttaattttggcatttaaaacggttaaa
acgaaaaacaatgctttagttgcacctgcagagctggtctcgattcctgctgagacacct
aaagagaacaagaaaaaactaagaaggtctaggaaggcttcagaaagattgaaagctctc
tccatagatgaggtcccatcgtgtacatttgaagtggattacaatgaagctgctgccaaa
ctcgaaagcctatacaaacttagccctacaagccatccctctgatgtcgatgatacagac
catgttgtgaggagaggggggcggcggaggactaaggaagtgggggatgaagagtacaag
attggtagtaatgtagtgaggagtgggcggaagtttccaatacgattgaatcttgctggg
aggatatcattgaggaataaaaacgattgtgaaatggcttgttctgttaggaggagaaaa
gatcccaagaacgaagaagacagaatccgcaagcttatcagggagtattcagtgtcgagt
gaattggttagctatgactggaagaagatgaagataccgccagttctgccttcttctgaa
cattcatttctgttcaagttgatgcagcctatgaaggaaattctcgaagttaaggggaac
ttggagcaagatttggggcaagagccaaggaatggtgatttggcagaggcaatgaagatg
actgtagtacagctaagaaagacgttagtggttggtcaagcggccagaaataagctagtt
aagcacaatctccggcttgttttgtttgtggtaaaaaaatatttccgagagtttgccaat
ggccctgaattttcggacctctgtcaagcaggggtgaatggtcttatcacagcaatcgac
cgctttgagccaaaaaggaagtttcggctctctacttatggtctgttttggatcagacat
gccatcattcgatcattgaccgtctcaagcttcttgcatgttccctttggccttgagtca
gttagggtagaaatccaacgagccaaactagagttgtcgtttgagcttaacagattacca
acagaagaagagattataaagaaagttggaatctctccttctaggtatcatgaagtgatg
agggcttcaaaaccagtatcctctctcaatgctaagcacaggacaactcaacaagagctc
attgatggacttgctgataccgaaggcgttgggggtgatgagcggcaacctgctcttctc
aggcttgctctcgatgatgtgcttgattctctgaagcccaaggaaagcttggtcatcaga
cagagatacgggctcgatggcaaaggtaataggacattgggagaaattgcagggaacttg
aatatctcaagagaaatggttcggaaacatgaaatgaaagctatgatgaagctcaagcac
ccggcccgagtcgattatcttcgccattatgctttctaa
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