Rhododendron vialii: 131319915
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Entry
131319915 CDS
T09330
Name
(RefSeq) autophagy-related protein 13a
KO
K08331
autophagy-related protein 13
Organism
rvl
Rhododendron vialii
Pathway
rvl04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
131319915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rvl04131
]
131319915
03029 Mitochondrial biogenesis [BR:
rvl03029
]
131319915
Membrane trafficking [BR:
rvl04131
]
Autophagy
Autophagosome formation proteins
ULK complex
131319915
Atg1 complex
131319915
Mitochondrial biogenesis [BR:
rvl03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
131319915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
131319915
NCBI-ProteinID:
XP_058206339
LinkDB
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Position
3a:31080377..31083366
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AA seq
609 aa
AA seq
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MDLQGNVHSEYGRFEQIVTQFLSKSLHIILDSRVPSVRQNGRNLLSGTPVTKSDKWFSLK
LGDRPASLDNLNLWHRNLTEPMIIDILLVQEVPDSSSDNNPTTTLGLGKYVETVIERWVV
QYEYSRTLFPHVVESSSSYKKTYKKSIILLRSLYAMMRLLPAYRPFRKLCSSTQASDFDI
NYKVSSFSAPFSREEEEVMKPYNFAYVDAPQGRLSISVTYRENLSCFNLNTSIAYPPQII
TDYVGSPATDPFRAFPSSEKGFSATSFSLRGVQSPSSTPFQRPHSWTSGLHRMSPSTQAL
GGSPPVHRTSTIPYESSSPPTDIYSHRIQNYKSVTHHKSTSFDEHQLSPPFSPSPSPSPP
TYLSGGNPVKVRRHSETAPMIIPHPMMGRSPRHLSPNLSDPNRHSLPPLSPRSTKFDASS
QDSTSGIRLPRRSESLRGGESHSGMSNLFSGQKGLRDSKDDSGRFSGLLSSSDSPRIGFS
RSSSKLSFQDDFDDFDFSGPFIVDDVDTSDSPVSQNLDGKRSSEFTKSQDAAVGALVQML
RTAPPLRQDSSCYSSHSSKTELEGEVGAISSGFFLPRKTSDALEELRSFKEMKDLLLSKS
GTQLVRKEA
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggatttgcagggtaatgtacatagtgaatacggaagatttgaacaaatagttacgcaa
ttcctatcgaaaagcttgcatatcattttagactctagggttccttcagttcgtcaaaat
ggtcgcaacctgttgtcgggcactccggtgacgaagagcgacaaatggttcagcttaaaa
cttggagatcgtcctgcttcgttagataacttaaatttgtggcacagaaatttgacggaa
ccaatgataattgacatattacttgttcaagaagtacccgattcttcgtctgataacaac
cccaccactacgttgggattgggaaagtacgttgagacagtaatagaaagatgggttgtt
cagtatgagtatagcaggaccttgtttcctcatgttgttgaatcttcgtcctcttacaag
aaaacatataagaagtcaatcatactattgcgttccctttatgcaatgatgaggctcctt
ccagcatatcggccctttcggaagctatgttcatcaactcaagcttctgattttgatatt
aactacaaggtttcttcatttagtgctccattttcgagggaagaggaggaagtgatgaaa
ccatataattttgcctatgtagatgccccacaaggtcgcctttccatatccgtgacttat
cgtgagaatctttcttgtttcaacctcaacacttctatcgcatatccaccacaaattatt
acggactatgttggcagccctgccactgacccttttagggctttcccctcttccgagaag
ggtttcagtgcaacatccttttcactgagaggggtacaatcgccttcttctacaccattt
caacgtccacacagttggacaagtggcctccacaggatgtctccttcaacgcaagccctc
ggcggatctccacccgtgcaccggacgtccaccattccctatgaatcttcatctccgccc
actgatatatacagtcataggattcaaaactacaagtcagtgactcatcataagtcaacc
agttttgacgagcaccagctttcacctccattctcaccatctccttctccgtctccccca
acatacctttctggtggtaatcctgtgaaagtccgtcggcattcagagaccgctcctatg
attatcccacacccgatgatggggagaagtcctagacacctttctcccaatttgtctgat
ccaaatagacattcactcccgcctttatctcccagaagcacaaagtttgatgcttcctcg
caggattccacatctggaatcaggttgccaagaagatcagagtcattaagaggtggcgag
tctcactctgggatgtcaaatcttttttcaggccagaaggggttaagagatagcaaagat
gactcaggccgtttttcaggtttgctatcttcaagtgactcaccacgcattggattctca
agaagctccagcaaattatctttccaagatgactttgatgattttgacttctcgggccct
tttattgtcgatgatgttgacacatcagattcccctgtcagtcagaatcttgatgggaaa
agaagttcagagtttacaaaatcacaagatgctgctgtcggtgcccttgttcaaatgttg
agaacagcacctcctctccggcaagattcaagctgttactcatctcattcctcgaagact
gaacttgagggagaagttggtgccatttcgtcagggttctttttgcctcgaaagacatca
gatgctctggaggagctcaggagtttcaaagaaatgaaagatttgctgctctccaaaagt
ggaacacagttggttagaaaagaagcgtaa
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