Rhododendron vialii: 131319944
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Entry
131319944 CDS
T09330
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
rvl
Rhododendron vialii
Pathway
rvl04120
Ubiquitin mediated proteolysis
rvl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131319944
04120 Ubiquitin mediated proteolysis
131319944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rvl04121
]
131319944
Enzymes [BR:
rvl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131319944
Ubiquitin system [BR:
rvl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131319944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-RING_11
zf-RING_16
zf_RING_Vps8
FlxA
Prok-RING_4
zf-C3HC4_4
zf-HC5HC2H
Zn_ribbon_8
zf-RING_Vps41
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
131319944
NCBI-ProteinID:
XP_058206394
LinkDB
All DBs
Position
3a:complement(31334385..31343080)
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AA seq
535 aa
AA seq
DB search
MMRLQTYGGLSLVATLVVIYHAFYSRGQFYPAMVHLSTSKISLVLLLNMGLVFMCFLWQI
TKWIFLGSLREAEDERLNEQSWREIMEILFAITIFRQDFSVTFLAMVTALLLIKSLHWLA
QKRVEYIETTPSVRMVAHIRIVSFMGFLLLLDSLFLYSSVRYLIQTRQASVSFLFSFEYM
ILATTIVSTFVKYVFYVRDMLMEGQWERKAVYTFYLELVRDLLHLSMYLCFFLVIFMNYG
VPLHLIRDLYETFRNFRVRIADYIRYRKITSNMDDRFPDATPEELSTSDATCIICREEMT
TAKRLSCGHLFHVQCLRSWLERQHTCPTCRAPVAPPENGTSTSGSWAEAHQQGTASTPSQ
SSSGDGEVNDIVRQHQARLQAAAAAASIYGRSFVYPSVDTFTGGPSNFGGQSLDGQSRQH
PFAIPDGPANFGSSQFPHCSFVPFLSPGSDVNYREKFGSNLNMPYFQLETQQQFLQDQIE
ILQNQLHLLQKSRTEKSMDVSVPSSSDIKGKAVAPSPSSVSDCSQHQEAEEPEKR
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggctacaaacgtatgggggtcttagtttggtagcgacactagtggttatttat
cacgctttttatagtagaggccagttctaccctgcaatggtacatttatcgacatccaag
atcagtttggtgcttcttctcaacatgggtctcgtctttatgtgtttcttgtggcaaata
accaaatggatattccttggatctctgcgagaggccgaggatgagaggctcaatgagcag
tcgtggcgggaaattatggaaatacttttcgcgatcaccattttccggcaggacttttcg
gttacatttcttgctatggtgactgctcttttgctaattaagtctcttcattggttggct
cagaaaagggtcgagtacatagaaacaaccccttcggttcgcatggtggctcatatccga
attgtttctttcatgggattccttcttctgctggacagtttgtttttgtatagttctgtg
agatatttgatacaaacccgtcaggcttcagtttccttcttattttcattcgagtatatg
atactggcgacaacaatagtttcaacatttgtaaaatatgttttttacgtcagagacatg
cttatggaaggacaatgggaaagaaaggcagtctacactttttacttggaacttgttcgg
gacttgctgcacttgtctatgtatctatgcttctttcttgtgattttcatgaattatggc
gtgcctctgcacttgattcgcgacctttatgagacatttcgcaactttagggttcgcatt
gctgattatattcgttatcggaagatcacttctaatatggatgaccgttttccagacgca
acacctgaagagctgagcacgagtgatgcaacctgcatcatttgtcgtgaggagatgact
acagccaagaggctaagttgcgggcatctgttccatgtgcagtgcctccgttcatggtta
gagcggcagcacacgtgtccaacttgtagggcccctgttgcaccacctgaaaatgggact
agtacttctggatcatgggcagaagctcatcaacaaggaacggcaagtactccttctcag
agttcaagtggagatggtgaggtaaatgacattgttaggcagcatcaggccaggctacaa
gctgctgctgcagctgcctcaatatatgggagatcttttgtttatccttctgtagatact
ttcacggggggcccttccaacttcggtggacaatctttggatggacagtcacgacagcat
ccatttgcaatcccagatggacctgccaactttggcagcagtcaatttccacattgcagt
tttgtccctttcttgtctcctggatcagatgtgaactaccgagaaaaattcggcagcaat
cttaatatgccatattttcagctggagacccagcaacaatttcttcaagaccagattgag
attttgcaaaaccagctccaccttctacagaagtcaaggaccgagaaaagcatggatgtg
agtgtcccatcatcttcagacatcaagggaaaggctgttgcaccatcaccttcatccgta
tcagattgcagtcaacatcaggaggctgaagagccagagaagaggtaa
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