Rhododendron vialii: 131319995
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Entry
131319995 CDS
T09330
Name
(RefSeq) RNA polymerase sigma factor sigA isoform X1
KO
K03086
RNA polymerase primary sigma factor
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rvl03021
]
131319995
Transcription machinery [BR:
rvl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
131319995
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Lac_bphage_repr
Motif
Other DBs
NCBI-GeneID:
131319995
NCBI-ProteinID:
XP_058206483
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Position
3a:complement(31712213..31719328)
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AA seq
507 aa
AA seq
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MATAAVIGLSAGKRLLSSSFYYSDIAEKLSYGNDYGLGHHQVFSSKKVIMAKKESSDRPS
FLSNRRSRSIRALREHADTACDPSTADVGLEKLDRLEEERPSLELSVDALILLQKSMLEK
QWNLSTEEVVTDRKLKDTREKIQFACSATSARKRRFDSRKKVVNRNHSTTELGESKQAKT
TISPELLRNRPKGYVRGVTSEQLLTHSEVVQLSKLIKIGLLFDERRSRLKERLGCEPLEE
QLASSLGISRTELRSKWIESSLALDKLAMSNVRLVMSIAQRYDNMGVEMADLIQGGLIGL
IRGIQKFDSSKGCKISTYVYWWIRQGVARAFFENSTTVSLPTHLHERLNLIRGAKLKLKA
KGLTPSTETIAACLNMSQQKVRNATEAVTRVFSLDRDAFPSLNGLPGETLHSYIADDRRE
NDPWVRVYGQTLKDEVKKILNTKLGERERYIIRLYYGMDGECLTWEDISSRIGLSRERVR
QIGLVAAEKIKQAARERRLDYLLEKIG
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggccacggctgctgttatcggtctcagtgcaggaaagaggctcttgagttcttccttc
tactattctgatattgcggaaaagctgtcatatggtaatgattatgggttgggtcaccat
caagttttttcttctaagaaagttatcatggcaaagaaggaatccagtgatagacctagt
tttttgtccaaccggcgcagccgatccatcagagctcttagagaacatgcagatactgct
tgtgatccttcaactgcagatgtggggcttgagaaactggaccgattggaggaggaaaga
ccttctctggaactttcagtggatgctctcattttattgcaaaagtctatgctggaaaaa
caatggaatctttccactgaggaagtagtaactgataggaaactaaaagatacacgcgaa
aagattcaatttgcttgttcagcgacatctgctcgaaagcggagatttgattctagaaag
aaagttgtgaaccgaaatcattccacgacagaactgggtgaaagtaagcaggcaaaaacc
acaatcagtccagaactgcttcggaaccgtccgaaaggatatgtgaggggggtaaccagc
gaacaattgctcacccactccgaagtagtgcaactatcaaaactaataaaaataggtctt
ctcttcgatgagcggagatcaagactgaaggaacgcttagggtgtgagcccttagaggag
caacttgcaagttccctggggatttctcgtactgagttgcgatcgaaatggatagagagt
tctttggctttagataagctagcaatgagcaacgttcgtctagtcatgtctattgctcaa
agatatgataacatgggtgtagaaatggctgacctcattcagggtggcctgattggatta
atccggggcattcagaaatttgattcttccaaggggtgcaagatttcaacctacgtgtat
tggtggatacgtcagggtgttgcgagggcattttttgaaaattcaactactgtaagcttg
ccgacccatttgcacgaaaggttaaatttaatccgtggcgcaaagttgaaactcaaagca
aaaggattaactccgtcaaccgagacaatagcagcttgcctgaatatgtcccaacagaaa
gtcaggaatgcaacagaggcagttaccagggtcttttcgcttgatagggacgcattcccc
tctttaaatggtcttcctggagaaacacttcatagttatattgcagatgatcgccgcgag
aatgacccatgggtacgagtatatggtcaaaccctcaaggatgaggttaaaaaaattctt
aatacaaagcttggagaacgggagagatatatcatacgtctttactatggcatggacgga
gaatgtcttacttgggaggatattagtagccggataggtttgtctagggaaagagtgagg
caaattggactcgtagcagcggagaaaataaaacaagcagcaagggagagacgacttgat
tacttgctggagaagataggatga
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