Rhododendron vialii: 131320000
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Entry
131320000 CDS
T09330
Name
(RefSeq) oligouridylate-binding protein 1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131320000
03041 Spliceosome [BR:
rvl03041
]
131320000
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
131320000
Spliceosome [BR:
rvl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
131320000
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
131320000
NCBI-ProteinID:
XP_058206498
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Position
3a:complement(31822807..31829584)
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AA seq
423 aa
AA seq
DB search
MMQQQQQQQQRLKQQQALMQQSLYHPGLLAPPPQIEPILSGNLPPGFDSSTCRSVYVGNV
HPQVTDPLLQEVFSSTGPIEGCKLIRKEKSSYGFVDYFDRRSAALAIVTLNGRHLFGQPI
KVNWAYASNQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRG
FGFVSFRTQQDAQTAVNDLNGKWLGSRQIRCNWATKGAGVNDDNHNLDGKSVVELTNGSS
EDGQERTNEDAPENNPQYTTVYVGNLAPEVSSADLHQHFHLLGAGVIEDVRIQRDKGFGF
IRYGTHAEAARAIQMGNARIFFGKPIKCSWGSKPTPPGTSSTPLPPPAAAQMPGFSAADL
VAYERQLALSRMGMGMGMGMGMGAQALMQPQAQQRFGAAGASQAIYDGGYPGIASTQPSI
YYQ
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagcagcagcagcagcagcagcagaggctgaagcagcagcaggcgttgatgcag
caatctctctaccaccctggccttttggctccccctccccagatagagcccatcttgagt
ggaaatctgcctcctgggtttgattcaagtacttgccgcagtgtgtatgttgggaatgtt
cacccacaggttacagacccacttcttcaggaggttttctcaagtactggtcctattgaa
ggttgcaagctcattcggaaggagaagtcatcctacggtttcgtggactactttgatcgc
agatcagctgctcttgctattgtgactcttaatggaaggcatctgtttgggcagcctata
aaagttaactgggcatatgccagtaaccagagagaggacacatcaggccactttaacatt
ttcgttggtgatcttagccctgaagttacggatgctaccctgtttgcatgcttctctgtt
tatcctagttgctcagatgcaagggttatgtgggatcaaaagactgggcgttcaaggggg
tttggattcgtctctttccgaactcagcaggatgctcaaactgcagtgaatgatttgaat
ggaaaatggctcggaagcagacaaatcaggtgcaactgggcaacaaagggagctggtgtt
aatgatgacaatcacaatttggatggcaaaagcgtggtggaactgacaaatgggagttca
gaagatggtcaagagagaaccaatgaggatgctccagagaataatcctcagtacaccact
gtttatgttggcaatcttgctccggaggttagttcagctgatctccaccagcatttccat
cttcttggtgctggtgttattgaagacgtccgcatacagcgagataaaggttttggtttt
ataagatatggtactcatgctgaagcagctcgggctattcagatgggaaatgcccgaatt
ttctttggcaaaccaattaagtgctcctggggcagcaaacccactccaccggggaccagc
tctactcctctgccaccgccagctgccgcacagatgccaggtttttctgccgctgacctt
gtagcttatgagcgacaactggcattgagtagaatggggatggggatgggaatgggaatg
ggaatgggtgcacaagctctgatgcagccgcaagcacaacagcgatttggtgctgctgga
gctagtcaggcaatctatgatggtgggtatccaggcattgcctccacccagccatcgatt
tattaccagtaa
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