Rhododendron vialii: 131320028
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Entry
131320028 CDS
T09330
Name
(RefSeq) protein CTR9 homolog isoform X1
KO
K15176
RNA polymerase-associated protein CTR9
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rvl03021
]
131320028
Transcription machinery [BR:
rvl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
131320028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_16
TPR_12
TPR_14
TPR_8
TPR_17
TPR_6
TPR_11
TPR_7
TPR_9
ANAPC3
Fis1_TPR_C
TPR_10
RPN7
Coatomer_E
YfbU
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
131320028
NCBI-ProteinID:
XP_058206542
LinkDB
All DBs
Position
3a:complement(32005452..32022575)
Genome browser
AA seq
1095 aa
AA seq
DB search
MASVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIEQFR
QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFIMATQYYNKA
SRIDMHEPSTWVGKGQLLLAKGDIEQAFNAFKIVLDGDRDNVSALLGQACVQFNRGRYSD
SLELYKRALQVYPQCPGAVRLGIGLCRYKLGQFEKAKQAFHRVLQLDPENVEALVALGIL
DLHTNEAGDIRRGMENMQRAFEIYPYCAMSLNYLANHFFFTGQHFLVEQLTETTLAITNH
GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKESNKPQEFVLPYYGLGQVQLKLGDFKS
SLGNFEKVLEVYPDNCETLKALGYIYIQLGQTEKAHEFLKKATKIDPRDPQAFLDLGELL
ISTDAGAALEAFKTARGLLEKGREEVPVELLNNIGVLQFERGDFELAEQTYREALGDGIW
CTIIKDKSPPYPIDASASIYQYKDTQIFHRLEEDGFTMEVPWNKISVLFNLARLFEQLNK
AESASILYRLILFKYPDYIDAYLRLAAIAKARNNVHISLELIADALKVDDKCPNALLMLG
DLELKNDDWVKAKDTFKAAKDASDGKDSYATLCLGNWNYFAAVRSEKRAPKLEATHLEKA
KELYTKVLSEHKANLYAANGAGVVLAEKGQFDVSKDLFTQVQQAASGSIYDEMPDVRINV
AHMHFAHGDFPLAVKMYQNCLRKFYYNTDSQVLLYLARTHYEAEQWQDCKKTLLRAIHLA
PSNYTLKFDAGVAMQKFSASTLQKQKRTVDEVRSTVAELKNAVRVFSQLSSASNLQFHGF
DEKKIDTHVNYCKHLLEAAKVHCEAAERDEQQNRQRIELAHQVSLAEEARRKAEEQRKFQ
MDRRKQEDEFKQVMQQEKNLERIKEQWKSISPATKRKDRSHFEDEEGGHNEKRRKKGGKK
RKRDKGSKTRYETNEAEADIVDDHEELDDEDGNMNYRDPSNPMNDQEDEGEENAQDLLAA
AGLEDSDAEDDVAAPSNISRRRHAWSESDDDEPQQRKPQSSPNGELSAEMQLSDGEIGGD
DDKLNADAVAADEDE
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgtgtatattccggtgcagaactccgaagaggaggttagggtcgtcctcgac
cagctccccagagacgcctcagatatactcgacattctcaaggccgaacaagcacccctc
gatctctggctcatcatcgcgagggagtacttcaagcaaggcaaaattgagcaattccgc
caaattctggaggaaggatctagtcctgaaatcgatgaatattacgcggatgtgagatac
gagaggattgccatcctaaatgctttaggggcttattatagttaccttggaaaaatcgag
acaaaacaaagagaaaaggaagagcattttatcatggcaacacagtactacaacaaagca
tcaagaattgacatgcatgaaccttctacttgggtcggaaaaggtcagcttttactggct
aagggtgacatagaacaggcatttaatgcattcaagattgtgttggatggcgatcgcgat
aatgtttctgcacttcttggtcaggcatgtgttcaatttaaccgaggtcgatattccgat
tcactggagttgtacaagagggccttgcaagtctatccacaatgtcccggagctgtaaga
cttggcatcggtctctgtcgttacaagttgggtcaatttgagaaggcaaagcaagccttt
caccgagttttgcagctagacccagaaaatgttgaagctcttgtggcacttggaattttg
gatttgcatacaaacgaagctggtgatattaggagaggaatggaaaatatgcaaagagct
ttcgagatttacccttactgtgcaatgtcactgaattatctggcgaaccacttcttcttc
actggtcaacattttctagttgagcaactaaccgaaactacacttgcaataactaatcat
gggccaaccaagtcacattcgtactacaatttggctcggtcgtaccatagcaagggggac
tatgaaaaagcgggactctactacatggcatctgtaaaggaaagcaataagcctcaggag
tttgtattaccttattatggtttgggacaagtgcaattgaaactgggagattttaaaagt
tctcttgggaactttgaaaaggtcttggaggtttaccctgataactgtgagacattgaaa
gctcttgggtacatttacattcaacttgggcaaactgagaaggcccacgagttcctcaag
aaagctactaagattgatccacgtgatccacaggcatttctggatcttggagaattgctg
atttcaactgatgcaggtgcagctttagaagccttcaaaacagcccgtggtcttttggaa
aaggggcgtgaagaagtaccagtagagttgctcaacaatattggagtcctacaatttgaa
agaggagattttgagctggctgaacaaacttaccgggaggctctaggtgatggcatttgg
tgcaccatcattaaggataaatcaccaccctatcccattgatgccagtgcatccatctat
cagtacaaggacacacaaattttccatcgacttgaggaagatggttttaccatggaagta
ccatggaacaaaatctcagtattatttaacctggctaggctattcgagcagttaaataaa
gctgaaagcgcaagcattttataccggttgatcttgttcaagtatccagattatattgat
gcttatctgaggcttgccgcaattgcaaaagctcgaaataatgtccatataagccttgag
ctgattgctgatgctctgaaggtggatgataagtgcccaaatgcattactgatgcttggt
gacttggagctaaaaaatgatgactgggttaaggcaaaagataccttcaaggctgctaag
gacgcaagtgacggaaaagattcttatgctactctttgtctgggaaactggaactacttt
gcagccgtccgctcagagaaaagagctcctaagttggaggccactcatctagaaaaagcc
aaggaattgtacacaaaagttctgagtgaacataaagcgaatctttatgctgccaatggt
gctggagtggtcttggcagaaaaaggtcaatttgatgtttcaaaggatctttttacacag
gtccaacaagctgcaagtggaagcatctatgacgagatgccagatgtgcggataaatgtg
gctcacatgcattttgctcatggcgattttccattagctgtgaaaatgtatcaaaattgt
ttgcggaagttttactataatacggacagtcaagttcttctctacctagctcgtactcat
tatgaagctgaacaatggcaagactgcaaaaagacattactaagagctattcacttggca
ccttcaaattacacattgaaatttgatgctggtgttgcaatgcaaaagttctcagcatca
acattgcaaaagcagaaaaggactgtggatgaggtgcgttcaactgtggcggagcttaag
aatgctgttagagtattcagtcagttgtcttcagcttcaaaccttcagtttcatgggttt
gatgagaagaaaattgatacccatgttaattactgcaagcacttactcgaggctgcaaaa
gttcactgtgaggcagctgagcgtgacgagcagcagaataggcagagaatagaacttgca
caccaggtctctttggcagaggaagcccgtcgaaaagctgaagaacagaggaaattccag
atggatagaaggaaacaagaagatgaattcaagcaagtgatgcaacaagagaaaaattta
gagcgcataaaggaacaatggaagagtatcagtcctgccactaagcggaaggataggtcg
cacttcgaagatgaggagggagggcataatgagaagaggaggaaaaagggtggaaagaaa
agaaagagggacaagggctctaagacacgttatgagaccaacgaagccgaagctgacatt
gtggatgatcatgaagaattggatgatgaagatggaaacatgaattacagggatccctct
aatccgatgaatgatcaagaagatgaaggggaagaaaatgcccaggatctactggcagca
gctgggcttgaagattctgacgctgaggatgatgtggctgcaccttccaacatcagtcga
aggaggcatgcctggtcagaatcagatgacgatgagcctcaacagaggaagccacaatcc
agtcctaatggagagctttcggctgagatgcaattaagtgatggtgaaattgggggagat
gatgacaagcttaatgcagatgctgttgctgctgatgaagacgaatga
DBGET
integrated database retrieval system
