Rhododendron vialii: 131320278
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Entry
131320278 CDS
T09330
Name
(RefSeq) heparanase-like protein 3 isoform X1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
rvl
Rhododendron vialii
Pathway
rvl00531
Glycosaminoglycan degradation
rvl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
131320278
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rvl00536
]
131320278
Enzymes [BR:
rvl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
131320278
Glycosaminoglycan binding proteins [BR:
rvl00536
]
Heparan sulfate / Heparin
Enzymes
131320278
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
131320278
NCBI-ProteinID:
XP_058206919
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Position
3a:complement(34379976..34384494)
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AA seq
562 aa
AA seq
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MKRWIVTDLELAYICKKKQKMGFLVLVKGFCILVCFFTFCFVSANSQNGERNGATVEGFV
FIDGNSAIGRIDSDFICATLDWWPPEKCDYGTCSWDHASLLNLDLNNKILLSAVKAFSPL
KIRLGGTLQDKVIYEDHKQPCIPFSKSTSELFGFTKGCLPLSRWDELNTFFKRTGALVIF
GLNALTGRTIRSDGSAVGTWDSTNAESLMRYTVGKGYSMYGWELGNELSGNGVGVRVSAD
QYASDTIALQNLVQKVYSNQQPKPLTIAPGGFFDVKWFKEFMAKTSKSVDVVTHHIYNLG
PGVDEHLVDKILDPSNLDREANTFSELQSTLRSSTTSATAWVGESGGAYNSGRNLVTNAF
VFSFWYLDQLGMASTFDTKTYCRQSLIGGNYGLLNATTFVPNPDYYSALLWNRLMGRNVL
STSFSGTKKIRAYAHCAKNSQGITLLLINLDNATTVQAKVAFHGSFTVQQKRKIHSNGKN
IILLPGENEIGEMEREEYHLTAKDGDLHSQIMLLNGKILGLNSYGDIPPLEAVTVNSSDP
ITVAPFSIVFAQIPDVGLPACK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaagagatggatagtcacggatcttgaattggcttacatctgcaagaaaaaacaaaag
atgggttttttagttttggtaaaggggttttgtatcttggtttgcttctttactttctgc
ttcgtgtctgcgaattctcagaatggggaaaggaacggagctactgttgaagggtttgtt
tttatagatgggaatagtgccattggaaggatagacagtgatttcatttgtgctaccttg
gattggtggcctcctgagaagtgcgattatgggacttgtagctgggaccatgcttctctg
ctcaatctggatctcaacaacaaaatacttttaagtgcggtaaaagcattttcgccactg
aagattagattgggcggcactttgcaagacaaggtcatctatgaagatcataagcaaccc
tgcattccgttttctaaaagcacctcagagttattcggtttcacgaaggggtgtctcccc
ttgtccagatgggatgaactcaataccttctttaagagaaccggggctctagttatattt
ggattaaatgctctaaccggaagaaccatacgatctgatggttctgcagtaggaacttgg
gactccacaaatgctgaatctcttatgcgttacactgtcggaaagggttactcaatgtat
gggtgggagcttggaaatgaattaagtgggaatggagtcggggttagagtttcagcagat
caatatgcctccgacacgattgctctgcaaaacttggtgcaaaaggtttacagtaatcaa
caacctaagccattaaccatagcaccaggaggcttctttgatgtaaaatggttcaaagaa
ttcatggctaagacatcaaaatcagtagacgttgttactcatcacatatataatcttggc
ccaggagttgatgaacatcttgttgataagattcttgatccatccaatcttgatcgcgag
gccaatacatttagcgaactccaaagcactctaaggagttccacaacctcagcaaccgca
tgggtgggtgagtcaggaggggcttacaacagcggtcgcaatcttgttaccaatgcattt
gtgttcagtttctggtatttggatcagcttggcatggcatcaactttcgatacgaaaaca
tactgcagacagtcgttgattggcggaaattatggtctactcaatgctactacgtttgtg
ccaaatccagactattacagtgcacttctctggaaccgcttgatgggaagaaatgttcta
tcaacaagcttttctgggacaaagaagatacgtgcatacgctcattgtgccaagaattcc
caaggaattacattgttattgatcaacctcgacaatgcaactacagttcaagctaaagta
gccttccatggttcctttacagtgcaacagaaaagaaagattcatagtaatggtaaaaat
attattcttctaccaggagaaaacgagataggcgaaatggaaagggaggaataccattta
acagcaaaagatggggatttgcacagccagattatgttgctaaatgggaaaattttaggt
ctaaattcatatggggacatacctccattggaggctgtaactgtaaattcgtcggacccc
ataaccgttgctcctttctccattgtttttgctcaaataccagatgttggtctccctgct
tgtaagtag
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