Rhododendron vialii: 131320309
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Entry
131320309 CDS
T09330
Name
(RefSeq) two-component response regulator ARR12-like isoform X1
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
rvl
Rhododendron vialii
Pathway
rvl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
131320309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rvl03000
]
131320309
Transcription factors [BR:
rvl03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
131320309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
131320309
NCBI-ProteinID:
XP_058206957
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Position
3a:34674879..34681249
Genome browser
AA seq
687 aa
AA seq
DB search
MTVEEIRARLGSENDRFPVGMRVLAVDDDPTCLKLLDTMLQKCQYQVTTTTHAKTALKML
RENRNRFDLVISDVEMPDIDGFKLLELVGLEMDLPVIMSSCHGDTSFVMKGITHGACDYL
VKPVRIEELKNIWQHVVRRKKLESKSSCLDKDRQENGGGGKGHAPTDNANGKLNRKRKDE
EEDEDEENEDPTTQKKPRVIWSVELHGKFVAAVKQLGIEKAVPKRILDMMKVEGITRENV
ASHLQKYRLLLRRIKSMEDQRVNMVPELGGKDFSSTPINSCHGLGDFLTFSGNGRFSNSG
LSGYQTGEILGNLNNPPGISLHNLSSSALLPQNHAQNLSDSNSNLGMPYSVISPANYKDR
FFQRNPTLLKIDQFQQTKCVSGIPEFNSACIPTTFADNIVPVSGLSNSLACGSRNPLFLQ
GIPKQTQSGGLFGNQSNLKVTSLNTEPLNAGISGSNFLDNSRFSHNWRNTIQLSKFSPNP
LSLSEQLNVDVPPNSWRNGNCSTGFQIQRNPVDFSSTNTISAPMQDSRGEIQRRTGLVGD
FAHGTNLATDLRWGEHQQDHTQHPNEIMVPPNAVMGPLGQVLDQNYGVCNRKSDASLVSH
SSFSDLLPLRDIQKSAMDSQMRSSEDYHLEQTKSPGSLGHDGYDDSLDYLMDAINKPGQD
LSEKVDGEFEYDAFLENRESRSSQVYP
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgactgtggaggaaattagagcgagattagggtctgaaaacgatagatttccggtgggt
atgcgtgttcttgccgttgatgatgacccaacttgtttgaagctattggataccatgctg
caaaaatgccagtaccaggttacaacgaccacccatgctaaaacggcgttaaagatgttg
cgggaaaacaggaacagatttgatcttgttataagtgatgtggaaatgccagatattgat
ggtttcaagctcttggagcttgttggtctcgaaatggaccttcctgtcatcatgtcgtcg
tgtcacggtgatacctcttttgtgatgaagggaattacacatggtgcttgtgactatttg
gtgaaacccgttcgaattgaggagctcaagaacatctggcaacatgtagtaaggaggaag
aagttggagtccaagtcctcctgcctagacaaggatcgccaagaaaatggagggggtgga
aaagggcatgcacctactgataatgcgaatggaaagctcaacagaaagagaaaggacgag
gaagaagatgaagatgaagaaaatgaggacccgacaacccagaagaagcctagggttatt
tggtccgtggagcttcatgggaagtttgttgcagcagttaagcaattgggtattgaaaaa
gctgtccctaaaaggatcctcgacatgatgaaggtcgaaggaattaccagggaaaatgtg
gcgagccatctccagaaatataggcttttgcttcgaaggatcaaatccatggaagatcag
agagtaaacatggttcctgaactagggggaaaagatttttcctcaacgccgataaattca
tgccatggacttggtgattttctaacattttctggaaatgggaggttttcaaactccggc
ctatcaggatatcaaactggtgaaatacttggtaacctgaataaccctcctgggattagc
ctccataacctttcttcttctgcactactcccacagaatcatgcccagaacttgagtgat
tccaattctaaccttgggatgccctattcagttatttccccagcaaattacaaggacagg
ttttttcaaaggaatccaacactattgaagattgaccaattccaacaaactaagtgcgtt
tctggcattccagagttcaattctgcttgcattccaacaacttttgcggataatatagtt
ccagttagtggcttaagcaactctctagcttgtggctcaaggaaccctttgtttctacag
ggaattccgaaacaaacacaaagtgggggactatttggtaatcagtccaatttgaaagtg
acctctttgaatacagaacctttgaatgctggaatcagtggttctaattttctggataac
agcagattcagtcacaactggcggaacaccattcagctatcaaaattttcacctaatcct
ttgtcattgagtgaacaattgaatgttgatgtgcctcctaatagctggagaaatggtaat
tgttcaactggctttcagattcaaagaaacccagttgatttttcttctacaaacacaatt
tcagctcccatgcaggattcaagaggagagattcagcgtcgaacaggcttggttggtgat
ttcgctcatggtacaaatttagctacagacctgaggtggggagaacatcaacaggatcat
acccaacacccgaatgaaattatggttcctcccaatgctgttatgggtccattaggccag
gttttggatcaaaactatggagtatgcaatagaaagagtgatgcgtccttggtcagccat
agcagcttttcagatctcctgccgcttagagatattcagaaatctgccatggactcgcaa
atgaggtcaagtgaagactatcatttggagcaaacaaagtcaccgggaagcttaggtcat
gatggttacgacgactctttggattatctaatggatgcaattaacaagccgggacaagat
ctaagtgagaaagtggatggagaatttgaatacgatgctttcttggagaatagggagagc
cgcagcagtcaagtctacccatga
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