Rhododendron vialii: 131320330
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Entry
131320330 CDS
T09330
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rvl
Rhododendron vialii
Pathway
rvl04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
131320330
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rvl04040
]
131320330
Ion channels [BR:
rvl04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
131320330
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
IQ
Motif
Other DBs
NCBI-GeneID:
131320330
NCBI-ProteinID:
XP_058206983
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Position
3a:complement(34844468..34852145)
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AA seq
745 aa
AA seq
DB search
MFDCGSKTQFLGGQQEKFVRLDDLDSRLSSPSTSAGMNKCTFGIEGLACGGHAASTPSKS
FKRGMRKGSEGLKSIGRSLRFGVSRAVFPEDLKVSEKNIFDPQDKFLQLWNQLFVASCIL
AVFVDPLFFYLLVFNRSSESSYDSYCLGIDRKLAIIATTFRTVIDAFYLLHMALQFRTAY
IAPSSRVFGRGELVIDHAQIAKRYLRCYFIIDFLAVLPLPQIVVFRFLQRSKGSDVLTTK
QALLFIVLLQYIPRFVRILPLTSELKRTAGVIAQTAWAGAVYYLLLYMLASHIVGAFWYL
LSVERYDTCWQKACKNASGECHTNFLYCGNQDMEGYDAWKNISNSVLTRACPVDGDNDNP
PFDFGIFSQALSSGIVFSKKFISKYCYCLWWGLQNLSTLGQGLQTSTYPGESIFSIALAI
FGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPQDLRERVRRYDQYKWL
ETRGVDEENLVQSLPKDLRRDIKRHLCLALVKRVPLFENMDERLLDAICERLKPCLYTEN
TYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRGVLREGDFCGEELLTWALDPKSGA
NLPSSTRTVKALTEVEAFALIAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQ
AAWRRYSKRKILELRRKEEEAEGLAGGSSNGGGVGGSYSLGATFLASRFAANALRGVHRN
RNLKSARDLVKLQKPPEPDFSADAD
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgttcgattgtggttccaaaacacagtttttgggtggtcagcaagagaaattcgtaagg
ttggatgacttggattctagattatcatcaccttctacttctgctggaatgaacaaatgt
acatttggcattgaagggttagcatgtggcggtcatgctgctagtaccccttcaaagtcc
ttcaagagagggatgagaaaaggatctgagggactgaagtccattggtcgatcacttaga
tttggtgtttctcgagcagtgtttccagaagatcttaaagtatcagagaagaatatattt
gatcctcaagataaattccttcagttgtggaatcaactttttgttgcatcatgtattctg
gcagtatttgtggatcctctgtttttctatcttctagtcttcaatcggtcgtctgagtcg
tcttacgactcttactgtctaggtatagaccgaaaattggcaatcatagctacaacattc
cgaacggtaattgatgctttctaccttcttcacatggcactgcaattcagaacagcttac
attgccccatcttctcgggtttttggacgaggtgaacttgtgatagatcatgctcaaata
gctaagcggtacctccggtgctattttatcattgattttcttgctgttcttccccttcca
cagattgtggtcttcagatttctgcagaggtcaaaaggttcagatgtactaacaacaaaa
caagcattgctttttattgtcttgctccagtatattcctcggtttgtccgaatcctaccc
ctaacttctgaattgaaaaggactgcgggtgtcattgctcaaactgcatgggctggtgct
gtatactatttgcttttatacatgttggctagccatatagttggggcattctggtactta
ttatctgtagaacgttacgatacatgttggcagaaggcttgtaagaatgctagtggagaa
tgccatacaaatttcttatattgtggcaaccaggacatggaaggctatgatgcctggaag
aatatcagtaattcagttcttactcgtgcttgccctgttgatggtgataatgataatcca
ccgttcgattttggaatcttcagccaggctttgtcgtctggcattgttttctccaagaag
ttcatatctaaatattgttactgtctgtggtggggactgcagaacttgagtactcttggc
cagggacttcaaactagcacctatcccggagagtcgatattctccattgcattagccata
tttgggctcatcctctttgctttattgataggcaacatgcagacataccttcagtctctt
actattcggcttgaggagatgagggtcaaaagacgtgactcagagcagtggatgcaccat
cgattgctcccacaagatctcagggagcgggtaagacggtatgatcagtacaagtggttg
gaaacacgtggagtagatgaagagaacttggttcagagtctaccaaaggatcttagaagg
gacatcaagcgacatctttgtctggctttggtgaagagggttcctctgtttgaaaatatg
gacgaaaggttgctggatgccatttgtgagcgactaaagccatgtttgtacacagagaac
acctatatagttcgagaaggagatccagttgatgagatgcttttcatcatacgcggtcgc
ctagagagtgtgaccactgacggtggaagaagcggatttttcaaccgaggtgtactgaga
gaaggggatttttgtggagaggagcttctaacatgggcactagaccccaaatctggtgct
aacctaccttcttcaactcgaacagtaaaggctttaaccgaagtggaggcatttgccctg
atagctgaggagttgaaatttgtggcgagtcagttcaggcggctccacagtaggcaagtt
caacacaccttccgtttttactctcagcagtggcggacttgggcggcttgctttatccag
gcagcgtggcggcggtattcgaagcggaaaattctggaactccgtcggaaggaggaagaa
gcagaagggttggctggaggcagcagcaatggtggtggcgttggaggctcatacagcctt
ggtgccaccttcttggcttcaagatttgccgcgaatgctcttcgtggggtccacaggaat
cggaatctcaagagtgcgagggacttggtgaaattgcagaagcctcctgagccggatttt
tctgctgatgctgattga
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