KEGG   Rhododendron vialii: 131320393
Entry
131320393         CDS       T09330                                 
Name
(RefSeq) uncharacterized protein LOC131320393
  KO
K12828  splicing factor 3B subunit 1
Organism
rvl  Rhododendron vialii
Pathway
rvl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131320393
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rvl03041]
    131320393
   03036 Chromosome and associated proteins [BR:rvl03036]
    131320393
Spliceosome [BR:rvl03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    131320393
 Complex B
    131320393
 Complex C
   U2 SnRNP specific factors
    131320393
Chromosome and associated proteins [BR:rvl03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    131320393
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 Cnd1 XMAP215_CLASP_TOG Vac14_Fab1_bd Adaptin_N UME DUF1249
Other DBs
NCBI-GeneID: 131320393
NCBI-ProteinID: XP_058207077
LinkDB
Position
3a:complement(5192924..5199907)
AA seq 1277 aa
MASLDSEIAKTQEEKKALEQQLASLTSVTYDKDLYGGNNRFEDYELSIPVNDEEENLDAM
DSEVARKLASYTAPKSILKDMPRGTGEDLDEAGFKRPQRIVDREDDYRRRRLNRVISPDR
HDAFAAGDKTPDVSVRTYQDVMQEELLKREKDDTLRAIAKKKKEEEERKAAGGEKESSGS
AVAAAASQPSQKRRNRWDQSQEDNAAKKAKSDWDLPDSTPGIGRWDATPTPGRVVGDATP
SLSRRNRWDETPTPGRLADSDATPSAGGVTPGATPAGMTWDATPKLAGLATPTPKRQRSR
WDETPATMGSATPMAGATPAAAYTPGVTPVGGVELATPTPGAINLRGAITPEQYNLLRWE
KDIEERNRPLTDEELDAMFPMEGYKILEPPPSYVPIRTPARKLLATPTPLGTPLYSIPEE
NRGQQFDVPKELPGGLPFMKPEDYQYFGALLNEEEEEELSPDEQKERKIMKLLLKVKNGT
PPQRKTALRQLTDKARDLGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVR
PFVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTT
ARAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVE
IIEHGLNDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLK
AIGFIIPLMDAIYASYYTKEVMFILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRS
DILPDFFKNFWVRRMALDRRNYRQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMV
METIEKVVANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKP
YLPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYP
EVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGA
EFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQ
NRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIY
AVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALIHLLNYVWPNIFETSPHVI
NAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPVL
EDEESNIFSRPELTMFI
NT seq 3834 nt   +upstreamnt  +downstreamnt
atggcgtctttggattccgagattgcaaagactcaagaggagaagaaagcgctggagcag
cagctcgcgtccctcacttcggtcacttacgacaaggatctctatggaggtaacaaccgg
ttcgaggattatgagctgtcgataccagtgaacgatgaggaggagaatttggacgcgatg
gattcggaggtggcgaggaaactggcttcgtacacggcccccaagtcgatactgaaggat
atgccgagagggacaggggaggatttagacgaagcggggttcaagaggcctcagaggatt
gttgatagggaggatgattacaggaggaggagattgaatagggtgatttcaccggatagg
cacgatgcttttgctgccggggataagacccctgatgtgtctgtgaggacttatcaggat
gtgatgcaagaggagttgttgaagagggagaaggacgatacgttgagggcaattgcgaag
aagaagaaggaggaagaggagaggaaggcggcgggaggggagaaggagagtagcggcagt
gcagtggctgctgctgcttctcagcctagccagaagaggaggaacaggtgggaccagtct
caggaggataacgcggcgaagaaagccaagtctgattgggatttaccagattcaactccc
gggattgggaggtgggatgcaaccccaactcctggtagggttgttggcgacgcaactcct
tccctttcgaggaggaacaggtgggacgagactcccactcccggtcgtttggctgattct
gacgcaaccccgtctgctggtggggttactcccggtgctactcctgctgggatgacttgg
gatgctacacctaagctagccgggcttgctactcccactcctaaacggcaaaggtcgagg
tgggatgagactcctgcaacaatgggaagtgcaacacctatggctggtgctactcctgct
gctgcatatacccctggtgtaactcctgttggtggggttgaacttgctacgcctacccct
ggagctattaatttgcgtggtgccattactcccgagcaatataatttgttgaggtgggag
aaagatattgaggagaggaatcgcccgttgactgatgaagagcttgatgcaatgtttcca
atggaggggtataagattcttgaaccccctccttcgtatgttcccattagaacacctgct
aggaagctccttgctacgccgactccgctagggactcctctttattcgattcctgaggaa
aacaggggtcaacagtttgatgttccaaaggaattgccgggtgggttgccgttcatgaag
ccagaggattatcagtactttggggcactattgaatgaagaagaggaggaggagttgtca
cctgacgaacagaaagaacggaaaattatgaaacttctgctcaaggtcaagaacgggact
cctccgcagaggaaaactgctttgcgacagctcacggacaaggctcgagatttgggtgcg
gggccactgtttaatcgaattttgcctttgctcatgcaacccacattggaagatcaggag
agacatcttttggttaaggttattgatagggtgctgtataagttggatgagttggttcgt
ccatttgtgcacaaaattctggtggtgattgaacccctgttgattgatgaagattattat
gcccgtgtagagggcagggagatcatttccaatctcagcaaggcagctggccttgcgacc
atgattgcagcaatgcgtccggatattgataacatagatgagtacgtgaggaacaccact
gccagagccttcagcgtcgttgcgtctgcactgggaattcctgcgctgttgccgttcttg
aaagctgtgtgtcagagtaagaaatcttggcaagctcgtcacaccggcatcaagattgtt
cagcaaattgctattttgataggctgtgcggttcttccgcacttgaggtctcttgtggaa
atcattgaacatggtctcaatgatgaaaatcagaaggtcagaactattacagctctgtca
ttggctgctcttgctgaggctgctgctccctatggtattgaaagttttgactcggttttg
aagcctctgtggaagggtattagatcccaccgagggaaagtcttggctgccttccttaag
gcaattggtttcatcattcctctgatggatgcaatatatgccagctactatacgaaggaa
gtgatgttcattttaatccgtgagtttcaatcgcccgatgaagagatgaagaaaatcgtg
ctgaaggtggtgaagcagtgtgtgagtacagaaggtgtggaggctgattatatccgaagt
gatatacttcccgattttttcaaaaacttttgggtcagaaggatggctttggatcgcaga
aactatcgacagcttgtggaaaccactgtggagatagcaaacaaggttggtgtcgccgat
attgttggaagaatagttgaggaccttaaagatgagagtgaaccataccggcgaatggtt
atggaaaccattgaaaaagttgttgctaatttgggagcatctgacattgatgctcgattg
gaggagctgctgattgatggaattctttacgccttccaggagcagaccagtgatgatgct
aatgtgatgcttaatgggtttggtgcagttgtaaatgctcttgggcagagagtgaagccg
taccttccccaaatatgtggtactatcaagtggcgtctgaataacaagagtgcaaaggta
aggcagcaagcagctgatctcatctccaggattgctgtggtaatgaagcagtgccaggaa
gagcaactaatgggccatcttggggttgtcttgtatgagtatttgggagaggagtatcca
gaagttttggggtcgatacttggagctctcaaggcaattgttaatgtcattggtatgacg
aaaatgactcctccaataaaggatttgcttcctcgattaacaccaatcttgaagaatcgt
cacgagaaagtccaggagaattgtatcgaccttgttggtcgaattgctgaccgtggtgct
gagtttgtaccggcaagagagtggatgaggatctgttttgagctcctggagatgcttaaa
gctcacaaaaagggtatccgtagagctactgttaatactttcgggtacattgcaaaagct
attggaccacaagatgttctggcgacactactgaacaatctcaaggtgcaggaacgtcag
aatcgtgtttgtaccactgttgcaattgcaatcgtggcggaaacatgttctccatttaca
gttttgccagccttgatgaacgaataccgcgtgccagagcttaatgtccagaatggagtc
ctgaaatcgctctcatttctgttcgaatacattggtgaaatgggaaaggattacatttat
gcagtgactccattgctagaggatgctctcatggacagggatttggttcataggcagact
gctgcttctgctgtgaagcacatggctttaggagttgctgggttgggatgcgaggatgct
ttaatccacttgctgaactacgtctggccaaatattttcgagacatccccacacgttata
aatgctgtcatggaagccattgaagggatgagagtggcgctgggagcagctgtagtgctc
aactactgccttcagggacttttccatccagcaaggaaggttcgggaagtgtactggaag
atctataactcattgtatattggcgcacaagacgcacttgtggctgcttatcctgtgctg
gaggacgaggagagtaacatattcagtaggcctgagttgaccatgttcatctga

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