Rhododendron vialii: 131320562
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Entry
131320562 CDS
T09330
Name
(RefSeq) uncharacterized protein LOC131320562 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rvl04131
]
131320562
Membrane trafficking [BR:
rvl04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
131320562
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
131320562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WD40_CDC20-Fz
WD40_Prp19
WD40
PEP5_VPS11_N
WDR55
Beta-prop_RIG_2nd
Synaptobrevin
Beta-prop_IFT140_1st
Beta-prop_HPS5
TFIIIC_delta
NBCH_WD40
Beta-prop_WDR19_1st
eIF2A
Motif
Other DBs
NCBI-GeneID:
131320562
NCBI-ProteinID:
XP_058207273
LinkDB
All DBs
Position
3a:complement(23691430..23710208)
Genome browser
AA seq
1093 aa
AA seq
DB search
MSMLAKLFHKPTESPQGSVTSKDLDPRVAVHCGIPSTASILAFDPIQRLLAIGTLDGRIK
VIGGDNIEGLLFSGKPVPFKYLKFLENQGFLVSVSNENEVQVWDLEHRCIVSNLQWESNI
TAFSVIYGTNYMYVGDEFGFLSILKYDAEKGELLQLPYHIPANLISEATGISSPNQQSVV
GVLSQPCSLGNRVLIAYENGLIVLWDITEDRAVLVKGNKDLQLKSDEVVDFPKNVSLEQF
TDTLDHEQAEKEISSLCWVSSDGSILAVGYIDGDILLWNMSTAAPRKDKQGQKASNVIKL
QLSSSDRRLPVIILHCSENILLTHCGGQLFVYGGDEIGSEEVLTILNLDWSSGIESLKCV
GRVDLTLNGSFADMILVPNATATEGYGISSLFVLSNPGQLHFYDDSCLSSLMSQPEKKHS
VPAVQYPEVIPTVEPYMTVGKLTLSEIVSEAQHRVAHTATTPSSKWPLTGGVPSQLSFAE
GDIIKRIYIAGYQDGSVCIWDAAFPVLSCIFVLGSKIEGIEVAGTNVSVSALDFLSSTSS
LAIGNEYGLVRLYKLTGNSDKPSLHFVTETKREVHDFHCNSGAQCTAIFSIFNSPVRTLQ
YMNSGDRLAVGFECGRVAMLDIRSLAVLFLTDCLSNSNSLAIAMPTFPIACGNLDHSGNK
TSIESAVEVIFILTRDAHIVVMDSTTGNMISSLSMHSTELSAISIYILESSFSPEGSCEN
PSMISSQDPEAKSERAQTNAHHQHDSVETKSDAFTQATYFGQDFVDSIVLICCEDALHLY
SLKSLIKGESESIRKVKLEKPCCWTTIFKKDGKASGLILVYQTGLIEIRSLPDLELVGES
SLMSILRWNFKTSMTKTISSSDTGHIVLVNGNEVAFISLFAFENDFRIPEALPCLHDKVL
EAATNATFMFSQSQKKQGTPPGIIGGIIKSFKGGTAENHGDGENIVAHLERIFSRFPFSD
PFTDIADDQEVVVLGIDDIDIDEPAPVTSSSHKRESKGKDIADKETERGKLFEGGSTGIE
PRMRTAEEIRAKYRKDGDASSAAAHARDKLVERQEKLEKLSRRTAELQSGAENFADLASE
LAKTMEKRKWWHI
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgctcgccaaattgtttcacaagcccactgaatctcctcagggaagtgtaaca
tcaaaagacttggatccacgtgttgctgttcactgtgggatcccttctactgcatctatt
cttgcttttgaccccatccaacgtcttctggctatagggacacttgatggtaggattaaa
gtcatcggcggtgataatattgaaggtcttcttttttctggcaaaccagtgcccttcaaa
tacttaaagttcctagaaaaccaagggtttctagtcagtgtctccaacgaaaacgaagtt
caggtttgggatctagaacacaggtgtatagtttctaacttgcagtgggagtccaacatc
actgccttttcggttatctatggcacaaattacatgtacgttggagatgagtttggtttt
ttatccatattgaaatatgatgctgaaaagggagaacttttacaattgccctatcacatt
cctgcaaatcttataagtgaagcaactgggatttcatcgcccaatcaacaatcagttgtt
ggtgtgctttctcaaccttgttcccttggaaatagagtgctgattgcctatgagaatgga
ttgattgttctgtgggatatcacagaagatcgggctgttcttgtaaaaggcaacaaggat
ctccaactgaagagtgatgaagtggttgattttccaaaaaatgtgagccttgagcagttt
actgatacattagaccatgaacaagcagaaaaagaaataagctctctctgctgggtatcc
tctgatggatcgattcttgctgtcggttacatagatggagatattttgttatggaacatg
tcaactgctgctcctaggaaagataaacaaggtcaaaaggcatctaatgtgattaagctc
cagttgtcatcaagtgacaggagactcccagtcattatattacattgctctgaaaacata
ttgcttacccattgtgggggccaactctttgtctatggtggtgatgaaattggatctgaa
gaagttctaacgatactcaatcttgattggtcttctggtatagaaagtttaaaatgtgtt
ggccgtgttgacctgactcttaatggatcttttgcggacatgattttagtgccaaatgcc
actgcaacggagggatatggaatctcttcactctttgtgttgagcaacccaggacaatta
catttctatgatgattcttgcctgtcttcattgatgtctcaaccggagaagaagcattct
gttcctgcagtgcaatatcctgaggttatacctactgttgaaccatacatgactgtagga
aaactcactctttctgagatagtttcagaagctcaacatcgagtagcacatactgcgact
acgccaagtagcaagtggcctttgactggtggtgttcccagtcaactgtccttcgctgag
ggtgatataattaagagaatatatatagcaggctatcaagatgggtctgtttgcatatgg
gatgctgcatttcctgttctgtcttgcatatttgtcttaggatccaagatagaaggcatt
gaagttgctggaacaaatgtttcagtgtcagcactggactttctctcctccacttcaagt
ttagcaatcggtaacgaatatggtctggttcgcctatataagcttactgggaattccgat
aaaccgagtttgcactttgtgacagaaaccaagcgggaagttcatgatttccattgcaat
agtggagctcaatgtacagctatattttccatcttcaattctccggtgcgcaccctgcag
tatatgaattctggagacagactagcagtcggatttgaatgtggtcgtgtcgcaatgctt
gatatcaggtcacttgcggttttgtttcttacagactgtctatccaattcaaattcgcta
gctatcgctatgccaacattccctattgcttgtggtaatttggatcattccggaaacaaa
acttccattgaatctgcggtggaagtaattttcatcttgaccagagatgcacacattgtt
gtgatggatagcaccacaggcaatatgatcagctctttgtcaatgcactcaactgagtta
tctgcgatctctatttatattttagagagcagtttttcccctgaagggtcctgtgaaaac
ccttcaatgatctcttctcaggatcctgaagcaaaatctgaacgtgcacaaaccaatgct
caccatcaacatgattctgttgaaaccaaatctgatgcctttactcaagccacatatttt
ggacaggactttgtcgactcaattgttttaatttgttgcgaggatgcactgcatttatac
tctttaaagtctctgattaagggggagagtgagtccatccgaaaggtgaagcttgaaaaa
ccatgttgttggaccacaatcttcaagaaagatggaaaagctagtggattgattctagtc
taccagactggactgattgagataaggtccctaccagatcttgaattggtgggagaaagt
tctctaatgtcaattcttaggtggaacttcaagactagcatgaccaagaccattagctct
tctgatacagggcatattgttctggtgaatgggaatgaagttgcttttatctctcttttt
gcctttgaaaatgacttcagaattccagaggctttaccttgtcttcatgataaagttctt
gaagctgctaccaatgctacatttatgttttctcaaagtcagaagaaacagggtactccc
cctggcattattggtggtatcataaagagtttcaaggggggtacagcggagaatcatggg
gatggagaaaatattgtggcacatttagagaggatattttctaggttccctttctcagac
ccttttacagacatcgcagatgaccaggaagtggttgtacttggcatagatgatattgat
attgacgaacctgcacctgttacctcttcttctcacaagagggaaagtaaaggaaaagat
attgcagacaaggaaacagaaagggggaagttatttgaaggtggtagtacgggtattgaa
ccgagaatgagaacagccgaagaaattagagctaaatatcgaaaggatggggatgcctct
tctgcagcggcacatgcaagagataagcttgtagagcgccaagaaaaacttgagaaacta
agcagacgtactgcagagctacaaagtggcgctgagaattttgcagacttggcgagtgaa
ctcgccaagacaatggaaaagcgcaagtggtggcacatatga
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