Rhododendron vialii: 131320570
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Entry
131320570 CDS
T09330
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
rvl
Rhododendron vialii
Pathway
rvl04142
Lysosome
rvl04144
Endocytosis
rvl05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
131320570
04142 Lysosome
131320570
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
131320570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rvl04131
]
131320570
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rvl04147
]
131320570
Membrane trafficking [BR:
rvl04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
131320570
Exosome [BR:
rvl04147
]
Exosomal proteins
Proteins found in most exosomes
131320570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
131320570
NCBI-ProteinID:
XP_058207283
LinkDB
All DBs
Position
3a:23754735..23769694
Genome browser
AA seq
1703 aa
AA seq
DB search
MAAANAPISMKEALTLPSVGINPQFITFTHVTMESDKYMCVRETSPQNSVVIIDMSMPMQ
PLRRPITADSALMNPNSRILALKAQLPGTTQDHLQIFNIEMKAKMKSHQMPEQVAFWKWI
TPKMLGLVTQTSVYHWSIEGDSEPVKVFDRTANLANNQIINYRCDPTEKWLVLIGIAPGS
TERPQLVKGNMQLFSVDQQRSQALEAHAAAFASLKVPGNENPSVLISFATKTINAGQITS
KLHVIELGAQPGKPSFSKKQADLFFPPDFADDFPVAMQISHKYSLIYVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTAEASSVGGFYAINRRGQVLLATVNEATIVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRSDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIGQLCEKAGLYVRALQHYSELPDIKRVIVNTHAI
EPQSLVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQVAKEYSDQLGVDACIKLFEQFK
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYSNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWEKVLTPENEFRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIRSIDRAVEFAFRVEEDAVWSQVAKAQLREGLVSEAIE
SFIRADDATQFLEVIRAAEDADVYHDLVKYLLMVREKAKEPKVDSELIYAYAKIDRLGEI
EEFILMPNVANLPSVGDRLYDEALYEAAKIIFAFTSNWAKLACTLVKLRQFQGAVDAARK
ANSSKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPEAWDHMQFKDVAVKVANVELYYKAVHFYLEEHPDLINDLLNVL
ALRVDHTRVVDIMRKAGHLLLVKPYMVAVQSNNVTAVNEALNEIYVEEEDYDRLRESIDL
HDSFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSGD
RDLAEELLVYFIDQGKKECFASCLFVCYDLIRPDVALELAWTKNMIDFAFPYLLQFIREY
TGKVDELIKDKLEALSEVKAKEKEEKDIMAQQNMYAQLLPLALPAPPMPSMGMGGGFAPP
PPTMGGMGMPPMPPFGMPPMGSY
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccaatgctccgatcagcatgaaagaggccctgacgctgcctagcgtaggg
atcaaccctcagttcatcaccttcactcatgtcacgatggaatcggataagtatatgtgc
gttcgggaaacctcgccgcagaacagtgttgtgattatcgatatgagcatgcccatgcag
ccgttgaggaggcctatcaccgctgattcggcccttatgaatcccaattccaggattcta
gctctaaaagctcaacttccgggaactactcaggatcacttgcagatatttaacattgag
atgaaagcaaaaatgaaatcacatcagatgccagagcaggttgctttttggaagtggatt
actccaaagatgttgggtcttgtcacacaaacctctgtttatcattggtccattgaaggt
gattctgaaccagtaaaggtgtttgatagaacagctaatttggccaacaatcaaataatt
aactatcgatgtgatcctacggaaaagtggttggttttgattggaattgctcctggctcg
acagagagaccgcaactcgtcaaaggaaatatgcaactgttttccgtggatcagcagcgc
agtcaagcacttgaagcacatgctgctgcgtttgcatcgctcaaagttccggggaatgag
aatccttctgttctcatttcttttgcaacaaagaccattaatgctggacagattacgtca
aagttgcatgttattgagcttggtgcccaaccaggaaaaccatctttctcaaagaagcag
gcagatcttttctttcctccagattttgcggatgactttccggttgccatgcagatatcc
cacaagtatagtttgatctatgtgatcaccaagctgggacttcttttcgtctatgacctg
gaaacagctactgcagtatacagaaataggataagtccagatcccatttttctcacagct
gaagcttcttcagttggaggtttctatgccatcaataggcgaggccaggtgttacttgct
actgtgaatgaagcaacaattgtgccttttgtcagtggccaattgaacaatctggaactt
gctgtcaatcttgccaaaagaggaaatctacccggtgcagagaatttggttgttcagcgt
ttccaagaattgtttgctcaaacaaagtacaaggaggctgctgagcttgctgctgaatct
ccacaaggcatccttcgcactcctgatacagttgccaagtttcagagtgttcctgtacaa
gctgggcaaacaccacccttgttgcagtactttggtactctcttaactagagggaagctt
aatgcatttgagtcgctggagttatcacgccttgttgtgaatcagaacaaaaagaatctt
ttggagaattggttggctgaagacaagctggaatgtagtgaagagcttggagaccttgtc
aagactgtggacaatgacctcgcattgaagatatatataaaagccagagcaactcccaaa
gtcgttgcagcttttgctgagcggagggagtttgacaaaattctgatatactccaagcag
gttggatatacacctgattatttgttcctcctgcaaacaattctccgatcagatccccag
ggagctgttaattttgcattaatgatgtctcaaatggagggaggttgtccagttgattac
aacacaataacagatctctttcttcagaggaatttgatccgggaggcaacagcatttttg
ttggatgttctgaaacccaatttgccagaacatgctttccttcagacaaaggtgttggaa
atcaaccttgttacattccccaatgtggcggatgctattttagcaaatgggatgtttagt
cattatgatcgtcctcgtattggtcaactttgtgagaaagctggtctttatgtgcgggct
cttcagcactactctgaactgccggatattaaacgtgtgattgtgaatactcatgcaatt
gagccacagtctcttgtggagttctttgggactctttctcgggagtgggctctggagtgc
atgaaggaccttctattggtgaatcttagaggcaaccttcagattattgtgcaggttgcc
aaggaatattcagatcagttgggagttgatgcatgcataaagctttttgagcaattcaag
tcatatgaagggttgtacttcttcttggggtcatatttgagctccagtgaggatccggac
atccactttaagtacattgaggcagctgccaagacgggacaaatcaaggaggttgaacgt
gtgaccagagaatcaaacttctacgatgctgagaagacaaagaacttcttgatggaagcc
aagcttcctgatgcacgaccacttataaatgtgtgtgatcgttttggatttgttccagat
ctcacccactacctttattcaaacaacatgctccgctacattgaaggatatgttcaaaag
gtaaacccaggaaatgctcctttagttgtagggcaacttttggatgatgagtgtcctgag
gattttataaaaggcctaattctatctgtccgttcgctgcttccagttgagccactggtt
gaggagtgcgagaaaaggaatcgacttcgattactaactcaattcttagagcatcttgtg
agcgagggaagccaagatgtacatgtccacaatgccctgggtaaaatcataatagacagc
aacaataatccagagcactttctcaccaccaatccttattatgattcacgcgttgtggga
aaatattgtgagaagcgtgatcccaccctcgccgttgttgcttaccgcagggggcaatgt
gatgatgaacttatcaacgtaaccaataagaactcattgtttaaattacaagccaggtat
gtggttgaaaggatggatggtgatttgtgggagaaagttctaacccctgagaacgaattt
agaagacagctcattgatcaagttgtttcaactgctttgcctgaaagcaagagcccagaa
caagtttctgcagctgttaaagctttcatgactgctgatcttcctcatgaattaattgag
cttctggaaaagattgtgctgcaaaactctgcattcagtggaaactttaatctgcaaaac
ttgctcattttgacagccattaaggctgatccgtctagagttatggattacattaataga
ctggataactttgacgggcctgctgttggtgaagttgcagttgaagcccaattgtatgaa
gaagcttttgcaatcttcaagaaatttaatttgaatgtccaggcagttaatgtcttactg
gataacatacgaagcattgatcgggctgttgaatttgcattccgagttgaagaagatgct
gtttggagtcaggtggctaaggctcaactcagggagggattagtgagtgaggcaattgag
tcatttattcgtgcagatgatgccactcaattcctagaggttattcgtgctgctgaggat
gcggatgtttaccatgacttggtaaagtaccttctaatggttagagagaaggcaaaggaa
cccaaggttgacagtgagctcatatatgcatatgcaaagattgataggctaggtgagatt
gaggaatttattctcatgcctaatgtcgctaatcttccaagtgttggtgatcgcttgtat
gatgaggcgctgtatgaggctgcgaagataatatttgcttttacttctaactgggccaag
ttggcttgcacactcgtgaagcttaggcagttccaaggtgctgttgatgctgcacggaaa
gcgaatagctcaaagacatggaaggaagtttgctttgcttgtgttgatgccgaggagttc
cgcttagctcaaatatgcggtctcaacattatcatacaggttgatgacttggaggaggtt
agtgaatattatcagaacagaggatgctttaacgagctaatatcccttatggagagtgga
ttgggattggaacgtgctcatatgggcatctttacggagttgggtgtcctttatgctaga
tatcgatatgagaagcttatggaacacatcaaattgttttcaactcgtctcaacattccc
aagctcattcgagcttgcgatgaacagcagcactggaaggaactcacgtacttgtacatt
cagtatgatgagtttgataatgctgcaactaccatcatgaatcactctccagaagcttgg
gaccacatgcagttcaaagatgttgcagtcaaagttgctaacgtggagctgtattacaaa
gctgttcacttctacttggaagagcatcctgatcttataaatgatcttcttaatgtgctc
gcacttcgcgtggatcatacacgtgtggttgacataatgcgaaaggctggtcacctgctt
cttgtgaagccatacatggttgcagttcagagcaataatgtgactgcagtgaatgaagct
ttgaatgaaatttatgttgaggaagaagattacgacagattacgagaatctattgatttg
catgatagctttgatcagattggacttgcccagaagattgagaaacatgagcttctagag
atgaggcgtgttgctgcgtatatctacaaaaaggcaggtagatggaagcaatccatcgcc
ttgtcaaagaaagataatctttacaaagatgccatggaaactgcctcacaatcaggagac
cgcgaccttgcagaggagttgcttgtttacttcattgaccagggaaagaaggaatgcttt
gcatcatgcctctttgtttgctatgatttgatacgcccagatgtggctcttgaacttgcc
tggacaaagaacatgattgactttgccttcccatacttgttacagtttatccgggagtat
acgggcaaggtcgatgaactcattaaggacaaactagaagctctcagtgaagttaaggct
aaagagaaggaagagaaggatataatggcacaacagaatatgtatgctcagttgcttcct
cttgccctgcctgcaccccccatgccaagcatgggtatgggtggtggttttgctccacca
ccacccaccatggggggaatgggtatgccaccaatgccaccatttggtatgccaccaatg
ggctcctactga
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integrated database retrieval system
