Rhododendron vialii: 131320597
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Entry
131320597 CDS
T09330
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rvl03009
]
131320597
Enzymes [BR:
rvl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131320597
Ribosome biogenesis [BR:
rvl03009
]
Eukaryotic type
Pre-60S particles
Helicases
131320597
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GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
DUF6550
Motif
Other DBs
NCBI-GeneID:
131320597
NCBI-ProteinID:
XP_058207321
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Position
3a:complement(24053999..24063752)
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AA seq
608 aa
AA seq
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MASTTYPPNSDNRALTETRFSDLKPPLSEPILEALTRSGFDFCTPVQAATIPLLCSFKDV
AVDAATGSGKTLAFVVPLVEILRRCSTLPKPHQVMGIVISPTRELSSQIYHVAQPFISTL
SHVKSILLVGGGDVKSDTKKIEEEGANILIGTPGRLHDIMERMDILDFRNLEVLILDEAD
RLLDMGFQKQINSIITRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRSEAKSCNE
SSSTQQLVSSKTPSGLHLEYLQCEADKKPSQLVDLLVENKPKKVIVYFMTCACVDYWGIV
LQRLAALKGFSIIPLHGKMKQTAREKALASFTSLSSGILLCTDVAARGLDIPGVDCIIQY
DPPQDPNVFVHRVGRTARMGRRGSSIVFLLPKEEAYIEFLHIRRVPLEEKKCSDNAPDVV
PDIRSAAKKDRNVMEKGLRAFVSYIRAYKEHHCSYIFSWKELEIGKLGMGFGLLQLPSMS
EVKNHSLSAVGFTPVEDINLEEIKFKDKSREKQRKKNLQAKKAALQQEPLKPQKPKTTAN
SAAATVLRKKTAKQRRTVQSMEDEDEMAREYRLLKKLKKGVIDENEFAKLTGTEDLEARH
NLCDCKDY
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacgacgtaccctcccaattccgacaacagggccttaaccgaaactcgcttc
tccgacctcaagccaccactctccgagccgatcctcgaggccctaacccgctccggcttc
gacttctgcaccccggtccaggccgctaccatccccttgctatgcagcttcaaggacgtc
gccgtcgacgccgccaccggttcgggaaaaaccctagccttcgtcgtcccactcgtcgag
atcctccgccgctgctccactctccccaagccccaccaggtaatgggtatagtaatatcc
cccaccagagaactgtcgtcacagatataccatgttgcccaacctttcatttctacatta
tcacatgttaagtcaatacttcttgtggggggaggagatgtaaaatcagatacgaagaaa
atagaggaggaaggagcaaatatattgattggcacacctggaagactgcatgacataatg
gagcggatggatattttggacttcagaaaccttgaggttttgatcttagatgaggctgat
aggttattggatatgggattccagaagcagataaattccattattactcgattaccaaag
cttagaagaactggtcttttttcagctactcagacggaggcagttgaagagctatccaag
gcaggattgaggaatcctgtgagggttgaagttcgatcagaagcaaaatcatgtaatgaa
tcatcatccacacaacagttagtctcttcgaaaacgccttctggtcttcatcttgagtat
cttcaatgtgaagcagataagaagccatcacaacttgtggatctccttgttgagaacaag
ccaaaaaaagttatagtctatttcatgacttgcgcttgtgttgattattggggaattgtc
cttcaacggcttgctgctctaaagggtttttctataatacctcttcatgggaagatgaag
cagactgcgagggagaaagcattagcttcatttacatctctttcgagtggcattcttctc
tgtactgatgttgcagctcgtggactcgacattcctggtgttgattgtataatacagtat
gacccccctcaggatccaaatgtatttgttcacagagtcggccgaactgccaggatggga
cgccgagggagttctatcgtctttctattacctaaggaggaagcgtatatagaatttctg
catatacgaagggtaccacttgaagagaaaaaatgctccgataatgctcctgatgttgtt
cccgatatacgatctgctgcaaaaaaggaccgtaatgtcatggagaaaggtctcagagca
tttgtttcttacatccgtgcttacaaagaacatcactgctcttatattttcagttggaaa
gaacttgagatagggaagctgggcatgggttttggcttattgcagcttccatcaatgtct
gaggtgaagaaccactcactttcagctgtgggctttactcctgttgaagatatcaacttg
gaggagatcaagttcaaggataaatctcgggagaaacagaggaaaaagaacttgcaagca
aagaaggcagcgttgcaacaagaaccactgaaaccgcagaagcccaaaacaactgcaaac
tctgctgcagccactgttctgaggaaaaagacagcaaagcagagacgcacagtccagtca
atggaagatgaagatgaaatggcgcgagaataccgcttgctcaaaaagttaaagaaggga
gtaatagatgagaatgagtttgcaaaattaaccggaactgaagatttggaggcgagacat
aatttatgcgactgtaaggactactga
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