Rhododendron vialii: 131320626
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Entry
131320626 CDS
T09330
Name
(RefSeq) CLIP-associated protein-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rvl03036
]
131320626
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rvl04812
]
131320626
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
131320626
Cytoskeleton proteins [BR:
rvl04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
131320626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
HEAT_2
Vac14_Fab1_bd
Adaptin_N
TOR1L1_N
PDS5
HEAT_DAAF5
MMS19_C
TPR_TTI1_C
INTS1_R4
UTP20
MMS19_N
Dopey_N
Rif1_N
SEN1_N
Npa1
Motif
Other DBs
NCBI-GeneID:
131320626
NCBI-ProteinID:
XP_058207362
LinkDB
All DBs
Position
1a:complement(45516181..45531501)
Genome browser
AA seq
1418 aa
AA seq
DB search
MEAALEAARAKDAKERMAGVEHLHQLLEASRKPLSSSEVTSLVDCCLDLLKDNNFRVSQG
ALQCLASAAVLSRDHFKLHFDALVPPTVERLGDGKQPVRDAARHLLLTLMEVSSPTIIVE
RAGTYAWTHRSWRVREEYARTVTSAIGLFASTELPLQRAILPPILQMLNDSNHGVREAAI
SCIEEMYTQVGPQFGDELQRHHLSTSVLKDINARLERIEPKVHSSDGLASSYTAVEIKPA
GLNPKRSSSKAKSSTREVSLFGGDSDITEKPVDPVKVYSEKELIREVEKIASTLVPDKDW
SLRIGAMQRVEGLVIGGAADYPCFRGLLKHLVGPLSTQLSDRRSTIVKQACHLLNFLSKE
LLGDFEACAEVFIPILFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRMADSAKNDRS
SILRSRCCEYALLILEYWADEPEIQRAADLYEDLIKCCVADAMSEVRATARSCYRMFAKT
WPERSRQLLLSFDPVIQRVIVEENESMHRRHASPSLRDRSSQISLTPQTPAPSNLPGYGT
SAIVAMDKSSSLASGMSPSSGLLFSQSKAVGQGTDRSLESVMQSSKQKVTAIESMLRGLD
TSEKRISTLRSSSLDLGVDPPSSRDPPFPLAVPASHNLTTSFGVDATTFGMSKGNKRNGG
LGMSDIITQIQASKDSSKLLYRSTVGAEPLSALSSYSAKRTPEKLQERGFYEENSDSKEG
WRPCNDSNYGESQNSYVPNFQRPLLKKNAIGRMSASRRRSFDDRQLLLGDMSSFLVAPAS
LNNTLSEGLNPSSDWNARVAAFNYLRSLLQQGPKGIQEVTQNFEKVMKLFFQHLDDPHHK
VAQAALSTLSEIIPACRKPFESYMERILPHVFSRLIDPKELVRQPCSTTLEIVGKTYGID
SLLPALLRSLDEQRSPKAKLAVIQFAISSFNKHAMNSEGFGNSGILKLWLAKLTPLAHDK
NTKLKEAAVSCIISVYSHYDSVAVLNFILSLSVEEQNSLRRVLKQYTPRIEVDLMNFMQN
KKERLRPKSYDPSDVVGTSSEEGYIGISRKNQAFGRYSAGSVDNTGGKNWSSEQESMPVT
GSIGQVASDETQVYSYRSPGYCVNIEVLSSETKDLNCIASSVDCDVKIEASSTPRLDMNG
LVSSDHMGVTAGIWHDNDALPELDLDHSKLAALKLNSARDTGVSIPQILHLICNGNDGNP
TASKRVALQQLVEASKENDHSIWTKYFNQVLMVVLEVLDDLESSIRELALSLIFEMLRNQ
KDAMEDSIEIIIEKLLHVTKDIRPKVANEAEQCLTLVLSQYDPFRCLSVIIPLLVTEDEK
TLITCINCLTKLVGRFSQEELTAQLSSFLPALFEAFGNQSADVRKTVVFCLVDIYIILGK
AFLPRLEGLNSTQLRLVTIYANRISQARTGTAIDANHV
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgctggaggcggcccgagccaaggacgccaaggagagaatggccggcgtt
gaacatctccaccaactcctggaagcttccagaaaacccctctcctcgtcggaggtcacc
tcgctcgtcgactgctgcttggatctcttgaaagacaacaactttagggtctcccagggc
gccttacagtgcctcgcctccgccgccgttctttcccgcgatcacttcaagcttcacttc
gatgccctagttcctcccaccgttgagcggttaggcgatgggaaacagcccgttcgcgat
gccgctaggcaccttttgctcactctcatggaggtttcatcaccaacgatcattgttgag
agagcagggacttacgcttggactcacagaagctggagagtacgggaagagtatgcacga
accgtcacatcagcaattggtctttttgcatccactgagctcccacttcaacgtgctatt
cttcctccaattctgcagatgttgaatgattctaatcatggtgtgcgagaagcagcaata
tcatgtattgaggagatgtatactcaagttgggcctcagttcggtgatgaactccagcgt
catcatctctctacgtcagttttaaaagatattaatgccaggctagagaggattgaacca
aaagttcactcttcagatggacttgcgagtagttacactgctgttgagattaaacctgcc
ggcctaaatcctaaaaggagtagctcaaaggccaagagttccacacgtgaggtgtctctc
tttggaggcgatagtgatatcactgaaaaaccagttgaccctgttaaagtttactctgag
aaagagcttataagggaagttgaaaaaattgcttcaactcttgtacctgacaaggattgg
tctctccgcattggagccatgcaaagagttgaaggtcttgttattggaggtgcagctgat
tacccgtgtttcaggggacttctgaaacaccttgttggccccttaagcacacagttgtct
gatcgaagatctactatagtgaagcaggcttgccacttgttgaacttcttatctaaagag
ctcttgggagattttgaagcgtgtgctgaagtgttcattccgatccttttcaagcttgtt
gtgataactgtacttgtaattgcagagtctgctgataactgcattaaaacgatgctgcgt
aattgcaaagttgcccgtgttcttccgcgtatggctgattctgcaaagaatgaccgtagt
tctatacttcgttcaaggtgttgtgagtatgccctcttgatattagaatattgggctgat
gaacctgaaatacagcgggcagccgatctctatgaagatcttattaagtgttgtgttgca
gatgcaatgagtgaggtacgagcaactgcaagaagttgctacagaatgtttgcaaaaact
tggccagagcgttcccggcagctgttgttgtcctttgatcctgttatccaaagagtaatt
gttgaagagaatgagagtatgcacagaagacatgcttctccttcccttcgtgacagaagt
tcacagatttctttaaccccacaaacacccgccccttcaaatctacctggatatggaact
tcggcaatagttgcaatggacaaaagttcaagtttggcctcaggtatgtctccctcttct
gggctactgttttcacagtcaaaggcagttggtcaaggtacagatcgaagcctggaaagt
gtgatgcaatcgagcaaacagaaggttacagctattgaaagcatgcttagagggttagat
acatctgagaaacgtatttcaactctccggtcatctagtttggatctaggagttgaccct
ccatcttctcgtgatccaccattccctcttgcggtccccgcttcacataatctaaccacc
tcttttggggttgatgcaactacatttggtatgtctaaaggtaacaaacgcaatggtggc
ttgggtatgtctgacatcatcacccagattcaggcttccaaagattcaagtaaattattg
taccgcagtactgtaggagctgagcctctgtcagctctttcatcttactcagctaagaga
actcctgaaaaactacaagaaagaggtttctacgaagaaaacagtgattctaaggagggt
tggcgcccatgtaatgattcaaattacggggaatcacagaatagttatgttcccaatttt
caaaggccacttttgaaaaagaatgctattggacgaatgtccgctagcaggaggaggagt
tttgatgatcgccagctgttactgggggatatgtcaagctttttggttgctccagcttct
ctcaacaatactcttagtgagggactcaatcctagttcagactggaatgctagagttgct
gcatttaattatctccgttctttgttgcagcaaggtccaaaaggcattcaagaggttaca
caaaattttgagaaggtaatgaagttatttttccagcacttggatgatccccaccataaa
gttgcccaggcagctctctcaacactctcagaaattattcctgcttgcagaaagccattt
gaaagttatatggagaggatcttaccccatgttttctcacgtttaattgatccaaaagaa
ttagtgaggcaaccttgctcaacaacgctggaaattgtcggcaaaacttatggcatagat
tctcttttaccagctttgcttcgttcactggatgaacaacggtcaccaaaggcaaaattg
gctgtcattcagtttgccataagttcctttaacaagcatgcgatgaactctgaaggcttt
ggtaatagtggcattctaaagttatggcttgctaaattgacaccattggcccatgataag
aacacaaaactgaaggaagcagcagtttcatgcattatatcagtttactcccattatgac
tcggtagcagtcctaaattttattcttagtttatcggttgaagaacagaattccttgaga
cgtgtccttaaacagtacactcctcgtattgaagtggatttgatgaactttatgcagaac
aagaaagagagactgcgtcccaagtcctatgatccttctgatgttgttggaacatcttct
gaagaaggatacattggaatctcaagaaagaaccaagcctttggaaggtattctgctggt
tcagttgataacactggtggcaagaactggagttctgaacaagagtcaatgccggtcaca
ggttccattggtcaagttgcatctgatgaaacccaagtgtactcatatcgtagtcctggg
tattgtgtcaacattgaggttcttagttccgaaaccaaggatctgaactgcatagctagt
agtgtggactgtgatgtaaagattgaggcttcttccacaccacgtttggacatgaatgga
ttggtgagctccgaccacatgggggtcactgcaggcatttggcatgataatgatgctctg
cctgaattggaccttgaccattcaaaacttgccgctttgaagcttaactctgctcgtgac
acaggtgtgagcattcctcaaattcttcacctgatttgcaatgggaatgatggaaaccca
actgctagcaagcgtgttgcacttcagcagttagttgaagcttcgaaggaaaatgatcat
tcaatttggaccaagtacttcaatcaggttttgatggttgttcttgaagtgttggatgac
ttggaatcctcaattcgggaacttgctctttcgttgatatttgaaatgctaaggaaccag
aaggatgccatggaggactctatcgagattataattgaaaaactgcttcatgttaccaaa
gacatcagaccaaaagttgccaatgaagcagagcagtgtttgactcttgtgctgtctcaa
tatgatccgttcagatgtcttagtgttatcatccctttgttggtgactgaagatgagaaa
actcttattacttgcataaattgtttaacaaagcttgttggcaggttctcccaagaggaa
ttgacggcccagttatcatcatttttgcctgcacttttcgaggcatttggaaaccaaagt
gctgatgtccgcaagactgttgtcttctgtcttgtggacatctacatcattcttgggaaa
gcattcttgccacgcttggaggggctcaacagcacacaactgcggttagtgactatctat
gccaaccggatctcacaggccagaacaggtaccgcaatagatgctaaccatgtgtag
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integrated database retrieval system
