Rhododendron vialii: 131320657
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Entry
131320657 CDS
T09330
Name
(RefSeq) uncharacterized protein LOC131320657 isoform X1
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rvl04121
]
131320657
Enzymes [BR:
rvl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131320657
Ubiquitin system [BR:
rvl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131320657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
Helicase_C
SHPRH_helical-2nd
PHD
zf-C3HC4_2
PHD_5
zf-C3HC4
zf-RING_UBOX
zf-RING_2
TPR_2
Motif
Other DBs
NCBI-GeneID:
131320657
NCBI-ProteinID:
XP_058207397
LinkDB
All DBs
Position
3a:complement(24972416..24992098)
Genome browser
AA seq
1705 aa
AA seq
DB search
MGRRKQLRPHRSGGIVEKCESDGRILDERNASEDSQKDEAVDVDAPLFVEVDRSSWGSNE
HFDISEVLLKDLNLSGDFSGYKLNESFYQDSKYSLRFRLCNVGEFVVRMGFGHLPVLPAS
YIRLEFIERRTCEDTVMDAVIVSGSFDGPDEGVSSLVHLLGQKFVALRPVVGFTFSEEMA
SLPVRVEILKSAFDACDSLVDTARQPWKKSMRSVMAWLRPEVMTSEARYGSSESTERELS
SGNAMNNDSTIPRERARFDAAGFYEAIKPSKVDPMLEDSTPDLLPELRPYQRRAAYWMVQ
REKGDSACSNETGRSQFLSPLCIPVNFIDTSSTMFYNPLSGNVSLHPECPSSYVFGGILA
DEMGLGKTIELLACIFAHRKSTSECGNIDNVMEITEDQKFILKRLKRERIECICGAVSES
SRYEGLWVQCDICDAWQHGDCVGYSTRGKIPKSREDSKGQGCKDKQTENYRKRMRRKNGF
KSVEMEGDHICQLCLELIQATDAPVATGATLIVCPSPILPQWHAEITRHTNPGSLKTCVY
EGVRNTSLTYTSRIDITELLGADIVLTTYDVLKEDLSHDADRHEGDRRMMRFQKRYPVIP
TPLTKIFWWRICLDEAQMVESNASSATEMALRLHAKYRWCITGTPIQRKLDDLYGLLRFL
KSSPFNVLRWWIEAIRDPYERGDIGARRFTHNFFKQIMWRSSKVHIAEELRLPPQDECLT
WLSFSPIEEHFYKRQHETCVDHAREVIESFRDDILKRKITGSVPSDAASDPFLTHVEAAK
LLNTLLKLRQACCHPQVGSSGLPSLQQSPMTMEEILSVLVGKTKVEGEEALRKSVVALNG
LAGIAIIKQDFSQAVLLYREALALAEEHRDDFRLDALLNIHIHHNLAEILPLTPEYFQHL
HSDDRCPEIVKAKSSRIDGVEKYDGKREKIRGKDSSDMNVDTDSLPEFASAPKANRSKRD
KECDDNTHIHSRLSCDQCLRMACENLKQKFLSVFNTKLSLAQQEFRKPHAQVCNAFSDRK
NQHAVWWLEALHLIEQNTDSSSELVTKIGEAVSGTLNASRTSKIAPWFQSITALKYYIQT
GLDSLEDSRKTLLERLLEIDETMGNPREEDIERVRYCPNCQADGDGLVCVHCELDELFQV
YEARLFRLSKGHNGGTNFTSVEEAVDLQKKKSALNRFYWTLSRADKNSSSSSVNYEDNGG
KRDVGEKVVVSRSPSELEVALGIIKGFSRTLLGRDGMVAASKQLLLLENFYLGKGMRKEY
AQSRSLAITQAQVLRAHDEIKMATSRLRLQEDEDDKSIDVLSPGELDAASVENSSDKFLA
LTSLSRIKGQLRYLKGLVQSKQKLQLENPNDSSLTEVAAASSTSSSEMENSCVVKADEEA
CPVCQEKLNKQKMVFQCGHVTCCKCFFAMTEGSPVHHGKTHAKWVMCPTCRQHTDYGNIA
FADDGQNRSDSSFQGRENSELGHENSEASITVHGSYGTKIEAITRRIRWISSTNPEAKLL
VFSSWNDVLDVLEHAFTANDISYIRMKGGRKAQYAISLFKGQISGGKQRAETNKMQKETK
SIQVLLLLVQHGANGLNLLEAQHVILVEPLLNPAAEAQAIGRVHRIGQEKRTLVHRFIVK
NTVEESIYKLNRSRSTSSFISGNKKNQDQPVLTLKDVESLLFTTKPPIVSESDERPSESL
MHLPPSVAAVMAAERRLKEHAEKSS
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgaagaaagcaactccggccgcataggtcaggggggatagtggaaaaatgcgag
agcgatgggcgcattttggacgagcgaaatgcttccgaagactcacaaaaggacgaggca
gttgatgttgacgctccgttgttcgttgaagttgatagaagtagctggggttcaaacgaa
cactttgatatttcggaagttcttttgaaggatttgaatttaagcggagatttttccggt
tacaaattgaatgagagtttttaccaagattcaaagtattctttgaggtttagattgtgc
aatgttggtgagtttgttgttcgtatggggtttggccatctgcctgtattgccagctagt
tatatacgcttggaattcatagaaaggcgtacgtgtgaggacacagtgatggatgctgtg
atagtgtcagggagttttgatggaccggatgaaggtgtttccagtcttgttcacttactt
ggtcaaaagtttgtggcgttgaggccagttgtagggtttacattttcggaggaaatggca
tctctaccggtgagagtggagatacttaagagtgcatttgatgcctgtgattctcttgtg
gacactgcaaggcagccttggaagaaaagtatgaggagtgtcatggcttggctgcgcccc
gaagttatgacttcagaggctagatatggatctagtgagtcaacggaacgggagctcagt
tcaggtaatgcgatgaacaacgattcaacaatccccagggaaagggccaggtttgatgct
gctggattttatgaagccatcaagccatcaaaggtggaccccatgttggaagatagcaca
cctgacttgcttccggagcttagaccatatcaacgcagagcagcttactggatggtacaa
cgagaaaagggagattctgcctgttcaaatgaaactggaagaagtcagttcttgtctcct
ctatgtattccagtgaattttattgatacaagttcaacaatgttctacaatccactgagt
ggaaatgtttcattgcatccggaatgcccttcatcatatgtctttggtggtattcttgct
gatgagatgggattggggaaaacaattgagctccttgcttgcatctttgctcatcggaag
tcaacatctgaatgtggcaatattgataatgtgatggaaattactgaggaccagaaattt
atcctgaaaaggttgaaaagagagcgtattgagtgcatatgtggagctgtgagcgaaagc
tctagatatgaaggcttatgggtgcaatgtgatatctgtgatgcttggcaacatggagat
tgtgtgggttattcaactcgaggaaaaattcccaaatccagagaagactccaaaggacaa
ggatgtaaagataaacagaccgagaactatcgaaagcgcatgagaaggaaaaatggtttc
aaatcagttgagatggaaggggatcatatctgtcagctgtgcttggaacttattcaagcc
actgatgctccggttgctactggtgcaactcttatagtatgtccgtctcctattttgccc
caatggcatgctgaaattactcgtcatacaaatccaggatccttgaaaacttgtgtttat
gaaggtgttcgaaacacttcgcttacatatacatcacggatagacattactgaacttctc
ggtgctgacatcgttttaacaacatatgatgtgcttaaagaggacttatcacatgacgct
gataggcatgaaggagaccgtcgcatgatgagatttcagaagagataccctgttatccca
actcccctcactaaaatattctggtggagaatttgtctggatgaggctcaaatggtagaa
agcaatgcttcctctgcgacagaaatggcactgcggcttcatgctaagtaccggtggtgt
attacagggactcctatacaacgcaagcttgacgacttatatgggctcttgaggtttctt
aaatcaagtccattcaatgttcttaggtggtggattgaagctatacgagatccatacgag
agaggagacattggagctaggagattcacgcacaatttctttaagcaaataatgtggcgt
tcttcaaaagtacacattgctgaagagctacggcttcctccccaggatgagtgtctcact
tggctctctttctcaccgattgaagagcacttttacaagaggcagcatgaaacttgcgtg
gaccatgctcgtgaagtaattgagagtttcagagacgacattctcaaacgaaaaatcaca
ggttccgtgccatctgatgctgcatctgatccttttctcacccatgtggaggctgcaaaa
ctgttaaacacactcttgaagcttcggcaggcctgctgccatcctcaagtgggaagttca
gggctgccttctttgcaacagtctcccatgaccatggaggagatattatctgttcttgtg
ggcaagaccaaggtagaaggggaggaagcactcaggaaatcagttgttgcattgaatggg
ctggcaggaattgctataatcaagcaagatttttcacaagcagtattgctgtacagagaa
gctctagctttagctgaggagcaccgtgatgatttccgcttggacgccttgttaaacatt
catattcatcacaatcttgctgagatactcccactgacccccgaatactttcagcatttg
cattcagatgaccggtgccctgaaatcgtaaaagctaagtcctccaggattgatggtgtt
gaaaaatatgatgggaaaagagagaaaataagagggaaagactcctcagatatgaatgtt
gacactgatagtttacccgaatttgcttctgcccctaaagctaatagatcaaagcgtgac
aaagaatgtgatgataacacccacatacattccagattgtcttgtgatcaatgtttgaga
atggcgtgcgagaatctgaaacaaaagttcttatctgtgttcaacacgaagctatccctg
gctcagcaagagttcagaaagccacatgctcaggtttgtaatgcattcagcgatagaaaa
aatcagcacgcagtttggtggttggaagcccttcatctcattgaacagaacactgactcc
tcaagtgaattggtcacaaagattggagaagctgtctccggtactttaaatgcttcaagg
acatcaaaaattgcaccatggtttcaaagcataacagctctgaaatattacatccagact
ggtttggattcactggaagattctaggaaaactttacttgagagacttctggaaattgat
gagacaatgggaaatccaagagaggaggatattgagcgtgtgagatactgtccaaactgc
caagctgatggtgatggtcttgtgtgtgttcactgtgaactagatgaattatttcaggtc
tatgaggccaggctctttcgtcttagcaaaggacacaatggagggaccaattttacatct
gttgaggaggctgtagacctgcaaaagaagaagtctgctctgaaccgtttctattggact
ttgtcacgtgctgataaaaattcaagttcatcgagtgtcaactatgaagataatggtggg
aagagggatgttggggaaaaagtagtggtatcaagatctccctctgaattggaagttgcc
cttgggattataaaaggtttctccaggactttattaggtcgagatggaatggtagcagcc
tccaaacagctacttcttcttgagaatttttacttgggaaagggaatgcggaaagaatat
gcacagtcaaggtctttggcaattactcaagctcaagttctgcgtgctcatgatgaaata
aagatggcaacctcacgattgcgtttacaagaggatgaggatgataaatctattgatgtg
ttaagcccaggagaactggatgcagctagtgttgaaaattctagtgataagttcttagcc
ttgacttcattatcccgcataaaaggacaactgcgttatctcaagggtttggtacaatct
aaacaaaaattgcaactagagaatccaaatgattcatcgttaactgaagttgcagctgcc
tcttccacttcttcttcagaaatggaaaacagttgtgttgtgaaagctgatgaagaagca
tgcccagtttgtcaagaaaagctcaacaagcaaaagatggtttttcaatgtgggcatgtt
acttgctgtaaatgtttctttgcaatgacagagggatcacctgttcatcatggaaagact
catgctaaatgggtgatgtgcccaacatgccgacaacatactgactatggaaatatcgct
tttgctgatgatggacagaatagatcagatagttctttccagggtcgtgagaactctgaa
ctgggtcatgagaactctgaagcttctattactgttcatggttcgtatggaacaaagatt
gaagccattacaaggagaatccgctggatcagttctaccaatccagaagcaaaacttctt
gtgttctccagttggaatgatgtcctcgatgtgttggaacatgccttcactgcaaacgat
ataagttatatcaggatgaaaggaggcaggaaagcacaatatgccatcagcctcttcaaa
ggacagataagcggcggaaaacaaagagcggagactaataagatgcaaaaagaaaccaaa
tctattcaagtattactgcttttagttcaacatggagccaatggtctcaatcttttagag
gctcagcatgttattcttgtagagccattactcaacccagcagcagaagcacaagccatt
ggccgggtccaccgaattggacaggagaagaggacacttgttcatcgcttcatagtgaaa
aatacagttgaagaaagcatatataaactgaacagaagcaggagtacaagttcattcatc
agcggaaacaagaagaatcaggatcaacctgttttgacgcttaaagacgtagagtcgctg
ctattcacaaccaaaccacctatcgtgtcagaaagtgatgagaggccaagtgaaagccta
atgcatttgccaccttctgtggccgccgttatggctgctgagagaaggctaaaggagcac
gcagaaaagtcaagttga
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integrated database retrieval system
