Rhododendron vialii: 131320728
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Entry
131320728 CDS
T09330
Name
(RefSeq) uncharacterized protein At3g06530 isoform X1
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
rvl
Rhododendron vialii
Pathway
rvl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
131320728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rvl03009
]
131320728
Ribosome biogenesis [BR:
rvl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
131320728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_At3g06530
HEAT_HEATR1
BP28CT
U3snoRNP10
HEAT_EF3_N
TOR1L1_N
Tti2
Importin_rep_3
Motif
Other DBs
NCBI-GeneID:
131320728
NCBI-ProteinID:
XP_058207521
LinkDB
All DBs
Position
3a:25875326..25900395
Genome browser
AA seq
2163 aa
AA seq
DB search
MATSIASQLKAIKSLIKTSDSDPRKRPFTRPSILFNPKEAADLDLDTLLSIAISGLEVLV
SADERFRNYKNDLFSHKSRELDRELMGIEENNQINIAISSYLRLLSGYFQLPSALKTLEY
LIRRFKVHVYNTEELILCALPYHDTHVFVRIVQLLDIGNSKWKFLDGVKASGAPPPRQVI
VQQCIRDRGVLEAFCNYASPTKKFHPSKAVISFCTAVVVEVLGSLTTLDDDVVKRVLPYV
LSGLQLDAKGGLDLKAGALMTVSLLASRVALSPKLVNSLIRSIAEVAREDAKESTDLQWF
RTSFMALVNLVQLQSVVIFPKKAVDSLKEIRDVSGILAGLTKEFNIDKFLAVFLESLLEY
SSSDDLCHFTLVSIIEAVPVKQFVNRIVSKLLYSCMRSSQKKNEPISSESGSWAKQILIS
INKMYPSEFLGAVHSFLEDAKVQSKNDGSIDEIMCRILDGNLDLSIDVSDSKIWFALEHP
KAEVRRSALSGLNAFGVLKEKSVGSERLVAIQDAVLRRLRDDDLTVVHAALTVNRLDVCI
CPPALIDALENVLQRCLGIVMSIASGDTSLPSDVAFLCLERAISNFQDQKEFAKQLATMT
FPLLLIVPKSQRLNLKALGLAKGLKWPFYQNLIIPSSLEKMLDHEHISSTNMDTIRGMAE
TLSRHPEEYMPWLVECCKFSELSKTFFFLVLLQSFTMPKIDVSRFNALYDACYQVLVAEW
HVLKSVGLVSAEESKTRMVDSDCKGFLDQLFEANFNTNFRQLNSKILVCLFWRILEVFVS
TMPADVSLDDSGKWMSTFQDLFVFLADSDRKNVFQKHLHFLVTKCKISPVRFLLKLVTEE
GVSVAVQVESLHCFVFLCSQLDESLHFELLGEFPSILVPLSSDNKDLRVAAMSCIEGLRT
LSPHVDFSKWKSGQSATCPHFLDELLSLMVQQKKLILSDRDVLPSFLTTLLSSSCHSLLV
PETIGQRFNQSIKNEILIFILRSALKLSTYAKLVILSLLKGLGRGVMRVEDVESLLSVLL
ERCRRYHFGKEKTFKKLSKVEVETLCLLLESCSVPTSSFDEPVFEDQLLEVLQFGGVTSE
DSAIVLPCITVLRNLNASFYRGLKTEKQDQLFRDLVLLFRSANGDIQNGTREALLRIEFS
CSTVVRILDSVFEQEVCIIGSPYGKKKKKHMSHLNQNSGRTGKNELSFLSSLLDFLLLKK
DLKNRTSLIGPLFKLLRKMFTDEPVHNDVDQDVQTMQASSGISQTVSSMICYNQQTLLLI
LEDISASLSTIVPSKDDTMNNFDLKLLINCARSTKDETTRNQVFSLLSTVAKVAPDKVLA
HIVDICTLIGESAVTQWNSHSQRVFEVLISAIVPCWLSKNGSIGTLLQIFVNVMPEVAEH
RRLPIILHLLRTLGESASLGSLLFLLFGSLVSRKLLSAPDNSLHSWDHLTSLTRIEWEFV
FAMRISEQYSCMIWLPSLVKLLQQIEIGTCGVQSFKELLVAMQFISDKLLDPEITFKLSS
GEESDDVQRTLGALMECIVSHLQLVDSSRKHVNFSTVVRKELKELMRTVLKNITKGLMPS
SYFNGIIKLLKHADRSVRRKALGLLSETVRDSDTTKLKHGRKGLTSKSSSWFHLDDSAVE
SFGEMCLEIVKLVDDSLDDSNTSLKVAAVSAMEVLVYKFPSYYSIFSMCLSSVTRHIQSD
NVAFSSSCIRTTGALINVLGPRALPELPSIMENVMSRSRVVSSSVSAITNYGEDRTSTLS
TSSKEPLFTSILLAFEAAIDKLGGFLNPYLGDILKLMVLHPKFLPGSDPKLKSKADIVRK
LITEKITVRLLLPPLLSLYSDAIKSGDSSLSIAFEMLGNLVRTMDKSSIVAYHAKIFDLC
LVALDLRRQHPVSIRSIEDVEKYVINTTIFLTMKLTETMFKPLFIRCIEWADSDLYESGG
VGSTNLDRAISFYGLVHRLAESHRSLFVPYFKYLLDSCIRHLTGAEDANVAVPRKKKKAK
HQEGYSNVDEENGTVTHQVWHLRTLVLSSLHRCFLYDTGNLKFLDSSNFQVLLKPIVSQL
VVEPPASLEEYASIPSLKEVDDLLVTCVGQMAVTAGTDLLWKPLNHEVLMQTRSEKVRSR
ILGLRIVKYLVESLKEEYLVLLPETIPFLGELLEDVELPVKSLAQEILKEMEFMSGESLR
QYL
NT seq
6492 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctcaatcgcctcccagttaaaggccatcaagtctctcatcaaaacctccgat
tcagacccccgcaagcgcccgtttactcgcccctccatcctcttcaaccccaaagaagcc
gccgacctcgacctagacaccttactctccatcgccatctcaggtttggaggttcttgta
agcgcggacgagaggtttaggaattacaagaatgatttgtttagtcacaagagtagagag
ttggatagggagctgatgggcattgaggaaaataaccaaatcaatatagccattagttct
tatttgcggttgttatcaggttattttcagctcccttcggccttaaagacgctcgagtac
ttgatacgtaggttcaaggttcatgtatacaacacggaggaactgattctatgtgctctg
ccttaccatgacacccatgtttttgttcgaatcgtgcagttgcttgacatagggaatagt
aagtggaaatttcttgacggtgttaaagcatcgggtgcaccgccacctaggcaagttata
gtgcaacaatgtattcgtgatcggggagttttggaggctttttgcaactatgcctcacct
acgaagaagtttcatccttctaaagccgtgattagcttctgcacagcagttgttgttgag
gttttgggttctcttacaactcttgatgatgacgttgtgaagagagtccttccatatgta
ctctccggattgcagcttgatgccaaaggtggtctagatctcaaggctggtgctttgatg
actgtcagtttgctagcgagcagggtagcattatccccgaaacttgtcaatagcttaata
aggtcaattgctgaggtagctagagaggatgctaaagaatctactgatttgcagtggttt
cgcacttcatttatggccttggtcaatctagttcagttgcaatctgttgtaatcttcccc
aagaaggcagtggatagtctgaaagagatcagggatgtttcggggattcttgctggactg
accaaggagttcaatatcgacaaattcttggctgtgtttctggaatctctcctggagtac
agttcttctgatgatctttgccattttactctagtatcaatcatagaggcagttcctgtg
aagcaatttgttaatcgtatagtgtctaagctcctttactcttgcatgaggtcatcacag
aagaagaatgagcccatatcatcagaatcaggaagctgggccaagcaaattttaatctcc
attaataagatgtacccatctgaatttcttggagcagttcacagttttctggaggatgct
aaagtgcaatccaagaatgatggttccatagatgagatcatgtgcagaatattagatggg
aatttggatttgtccattgacgtctctgattctaaaatttggtttgcactggaacatcca
aaggctgaggttcgacgctctgcactttctgggttgaatgcatttggcgttctcaaagag
aagtctgttggttcggagagacttgtagctattcaagatgcagtattacgtcggcttcga
gatgatgatcttactgtggtgcatgcagctctaactgtaaatagattggatgtctgcatt
tgtcctccggctcttattgatgcgcttgagaatgtgcttcagagatgtctcggaattgta
atgtcaattgcatcgggtgacacatctctacctagcgatgttgcttttttgtgtctcgaa
cgggctatttcaaacttccaagatcagaaagagtttgcaaaacaacttgcaacgatgacg
tttcccttgctgctaatcgtaccaaagagtcaaaggttaaatttgaaggctttaggattg
gccaagggattaaagtggccattctaccagaatcttatcattcccagcagcctggagaag
atgttggatcatgagcacatttcttctactaatatggatacgataagagggatggcagaa
acattgtcaaggcaccctgaagagtatatgccttggcttgtagaatgctgcaagttttcg
gagctgtcaaagacatttttcttcttggttttgttgcagtcattcacgatgcctaagatt
gatgttagtcggtttaatgcattgtatgatgcttgctatcaagttctggtagctgagtgg
catgtgttgaagtctgtgggacttgtatctgcagaagagtccaagacaagaatggtggat
agtgattgcaaaggctttctggatcagctgtttgaggccaactttaacaccaattttagg
caactgaattcgaagatactagtttgcttattttggaggatactggaggtgtttgtctca
acaatgccggcagatgtctcattggatgatagtggaaagtggatgtccacatttcaggat
ctatttgtgttccttgctgactcagaccggaagaatgttttccagaagcatcttcacttc
ctagttacaaaatgcaagatctctccagtccgatttttattgaagcttgtcactgaagaa
ggtgtttctgttgctgttcaagtcgagagtcttcattgttttgtgtttctttgttctcag
ttagatgaaagcttacattttgaacttcttggtgaatttccttcgattcttgttccactg
tcaagtgataacaaggatttacgggtggctgccatgagctgtattgaagggttgcgcaca
ctgtcgcctcatgttgatttctccaaatggaaatctggacaaagtgcaacgtgtccacat
tttcttgatgaacttctgagcctgatggttcaacaaaagaagctgatactatcagacaga
gatgttttgccttcatttttaacaactttgctgagttcttcctgccatagccttttagta
ccagagacaattggacagagattcaatcaatctataaagaatgagatactgattttcatt
ctacgctctgccctaaaactttccacatacgcaaagctagtcattttgtccttgcttaaa
ggactaggaagaggagttatgcgtgttgaggatgttgagtcgttgctctctgtacttttg
gaaagatgtcgccggtatcattttgggaaagaaaagacattcaaaaaattgtcaaaagtt
gaagttgaaaccctctgcctactattggagagctgctctgtgcccacctcttcatttgat
gagcctgtttttgaagatcaactattggaggttctacagtttggtggagtgacctctgaa
gattctgccattgtgctgccttgtataactgtgttgaggaatctcaatgcttccttttac
agaggtttgaaaactgagaaacaggatcaacttttccgagacctggtgcttctgtttcgg
tctgctaacggtgacatacaaaatggcactagggaggcattactgcgtatagaattttct
tgctccacggtcgtcaggatacttgattctgttttcgagcaagaagtttgcataattggt
tctccatatgggaagaagaaaaagaaacatatgtctcatcttaaccaaaatagtggaaga
actggcaaaaatgaactttctttcctgagctctctcctagattttttgctgctgaagaaa
gatttaaagaacaggacttccctaatagggcccttatttaagcttctacgcaaaatgttt
acggatgagccggttcacaatgatgttgaccaggatgtgcaaactatgcaagcttcatcg
ggcatctctcaaaccgtttccagtatgatatgctacaatcaacagacgctactgttgatt
ctggaagatataagtgcctcactttcgactattgttccttcaaaggatgatacaatgaat
aactttgacttgaagcttttgattaattgcgcccgatctacaaaggatgaaaccactcgc
aatcaagtattttcattattatctactgttgcaaaggttgctccagacaaagttttggcc
catatagtggatatttgtactcttattggggaatcagctgtcacacagtggaacagtcat
tcacaaagagtgtttgaagttctcatatcggcaatagtgccttgctggttatctaagaat
ggcagcataggcacattgcttcagatttttgtgaatgtaatgcctgaagttgctgagcat
agaaggctgccaattatcttgcatcttttgaggactcttggagagagtgctagcttgggt
tcattactttttctccttttcggttcattggtttcaaggaaactattatctgcccctgat
aatagtctacactcgtgggatcacttaacttctcttactcgtatagaatgggagtttgta
tttgcaatgagaatatctgagcagtattcatgcatgatatggcttccttcacttgttaag
ctgcttcaacaaatagaaattggtacttgtggtgtacaaagttttaaggaactgctagtt
gctatgcagttcatttcagacaaactgctagatcctgaaattacatttaagctcagttct
ggtgaagaatcagatgacgttcagagaacacttggagcacttatggaatgtattgtttct
catttacaactggttgactcgagcagaaagcatgtaaatttttccacagtcgtcaggaaa
gaactgaaggagttaatgcgtactgtcttgaaaaatattacgaaggggctcatgccgtca
tcatacttcaatgggattattaaattgctgaaacatgcagatagaagtgtgaggaggaaa
gctctcgggcttctttcggaaactgtcagagactctgacactacgaaactgaagcatggg
agaaagggtttgacttcgaagtcaagttcttggtttcatctagatgacagtgctgtggag
tcatttggggagatgtgtttggaaattgtcaagttggttgatgattctctcgatgattct
aatacttcattaaaagtggcagctgtttcagcgatggaagttttggtgtacaagtttcct
tcctattattcgatattcagcatgtgcctctcatctgtaaccagacacatccagtcagac
aatgtggcattctcttcttcctgcattcgaacgactggtgctttgatcaatgtgcttggt
ccaagggcccttcctgagcttccttctatcatggagaatgtgatgagtaggtctcgcgtt
gtctcctcatctgtgtctgcaataaccaattatggcgaagatagaacttctacgttgtca
acatcctccaaggaacctctcttcacgtctattcttctcgcattcgaggcagctattgac
aagcttggtgggtttttaaacccatatcttggagacattctaaaactcatggtgttgcat
cccaagtttttgcctggatcagatccaaaattgaaatcgaaagctgatatagttcgaaag
cttataactgagaaaataactgtccgacttttgcttccaccgttgctgagcttgtactct
gatgctattaaatctggtgattcaagtttatcaattgcttttgaaatgttgggaaatttg
gtccgaacaatggataaatcatcaattgttgcttatcatgcaaaaatattcgacttatgt
ttggtagcacttgatcttcgccgtcaacatcctgtttcaattaggagcattgaggatgtt
gagaaatatgtcatcaacacaacgatctttcttactatgaagcttacggagacaatgttc
aagcctttattcattaggtgtattgagtgggctgattcagatttgtatgaaagtggaggt
gtgggaagcacaaatcttgatagggcaatttctttctatggattggtacatagactagct
gaaagccacagatctttgtttgtcccttacttcaagtacttgcttgatagttgtatacga
catttgacgggcgctgaagatgcaaatgttgctgtgccacggaaaaagaagaaggccaaa
catcaagaaggttatagtaatgtagatgaggaaaatggtacagtgacgcatcaagtatgg
catcttcggacgttggttctatcttccttacacagatgtttcctttatgatactggaaac
ctgaagtttcttgactcgtcaaattttcaggttctgttaaaacctattgtatcacagctg
gtcgtagaaccacctgcttctttagaagaatatgcaagcataccttcattaaaagaagtt
gatgatttgttggttacttgtgttggtcaaatggctgttacagctggcaccgaccttctc
tggaagcccctgaatcatgaggtgttgatgcaaactcgtagcgagaaggttcgatcccgc
attttggggctgagaattgttaagtaccttgtggagagtcttaaagaagaatatttggta
ttattacctgaaaccatccctttcctcggtgaattgctggaagatgttgaactaccggtc
aagtctcttgcacaagagatactcaaagaaatggagttcatgagtggtgaaagcctccga
caatacctctga
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