Rhododendron vialii: 131320735
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Entry
131320735 CDS
T09330
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rvl03021
]
131320735
Transcription machinery [BR:
rvl03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
131320735
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_N
Med13_C
CBM9_2
Motif
Other DBs
NCBI-GeneID:
131320735
NCBI-ProteinID:
XP_058207543
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Position
3a:complement(24274472..24298521)
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AA seq
1988 aa
AA seq
DB search
MWTNVFKIGGFRQISWFQFLPHESDLNPLPDKSTKLEQKDAATLLVLSSHLQLQKEGFLS
AWTNSFVGPWDPSQGVHNPDEKIKLWLFLPGRYASVIEFAQAAVSRLRVVASGVWLAPGD
SEEVASALSQALRNRIERALNGLSYMRFGDAFSKYQPFSQSEELFRRGQPVVEFIFAATE
EAIFVHVLISAKHIRALSSSDMEKIQNDASHYSGDRLPVITAPHGMRGRVSAFCPSDLVK
QVYLSSGKFRTSNGIVGLQRDVSQVSGSHLKGQSCYVEVTLGFPSTGDNDAHNSNLKKSL
LKHHDTESSAVASGIQKGLHDQFSVSERTFIYPVEAVIVPVLQTSFARSSLKRFWMQNWI
GPSLSGSPFLMPCVGERDSADGSWTKANGIRSEQDYHSSSNSISSSISSISGTSSDSDCQ
MAAGVGELDADADSLTSRQSGLSSYEFPNNGSKSGSKRPRAGIGETFGQAALVTNGPIQD
AYKSDYGSLEVSNSSITGVANDVGSHWDWEDDNRGMDIQALLSEFGDFGDFFENDALPFG
EPPGTAESQALMFSIPDSGDLGSSPNTGIMDAADQMLLPVGFPSFDNFNQPSVATEEIPS
KNQEVVKNAVSSVAVGTTPASSVGEFDHLVKAEALMTFAPEYGAIEIVTSEFSTSIFSNP
YIPKSRKVESTNSSPESYVYSATPPSSPCLDGSDEKHGVAVMSKACSNRQDSSTSLHPKT
YYTAVERGKEHDKRLIACNNSVATHGVAPPSSLSGFNSTNAVKSGLKTNEATVEPDNFLM
STRTVLATEVECLMFQASMCRIRHTLISSCSPPPMGSIRLAGNSFLNQVHCEPNTGTGIV
FSKYEVKKKDSIPVRIAGDIDSGLLEGPLNAPVGVWRSVAVPKVTKPSMSPSMEICPSLP
SHSSEEGILSYGQRQPLQEFLDGLALLVQQATSFVDVALDADCGDGPYGWLALQEQWRRG
LACGPSMVHAGCGGSLASCHSLDIAGVELVDPLLADVHASSVIGLLQSDIKTALRSSFGS
LDGPLSVTEWCKGRSGDAGTVGDGFASELTGGECRDSSSTVTLPVGEQLSPSQSSLGVKG
GGRVEETSQWRSNQETSASESEQQLGFRRRPTLFVLPAPALLVGYQDDWLKTSASSLQLW
EKAPLEPYALQKHMTYCVICPDIDPLTTAAADFFQQLSTVYETCKLGTHSPQSLGNHMEV
DSGKWSSSGFILLDCPQSMKIESSTASLVGSISDYFLSLSNGWDLTSFLKSLSKVLKALN
LDSCFASNPKEGSTGPCTVIYVVCPFPEPVAVLQTVIESSIAVGSIILSKDKEKRSIIHS
QVGKSLSCSASVDEASISNVLTLPGFCIPKLVLQIVTVDAIFRVTNPALNELVILKEISF
TVYNKARRISRGSSTSTTDVVQSSSMSSRSHSASMQMTSPISGMWKECIGPRITGPRESE
LDPTLRHGSWDNNNWQSSRAAGGFGIDPHRTGDFLIQDEIRYMFEPLFIIAEPGSLEHGV
SPTIFANIASETSKPSLSDDCTSGSIVQSSVDSTGPCSQSDGSEGAEGFGSSGHQKTLPT
LHCCYGWTEDWRWLVCVWTDSRGELLDSHVFPFGGISSRQDTKGLQYLFVQLLHQGCQIL
QSCSSPDSGVVVKPRDFVITRIGCFYELEYQEWQKALYSVGGCEVKKWPLQLRRSAPDGM
LGSSNGTSLQQEQEMTLIQERTLPSSPSPIYSGHSKASGFVKGGGLGQSSGRKQLMGGPP
VIDHPRGMLQCVQSISFISISVDHSLHLVFQADSASPGTTQGSTSTVNVSGGYIEGFTPV
KSLGSASTSYVLIPSPSMRFLPPTPLQLPTCLTAESPPLAHLLHSKGSAIPLSTGFVVSK
AVPSMGMGNDSSRRSNSSKEEEWPSVISVSLVDHYGNGSNNSGNTQEKTKRGIVRGSEAR
DFEIETHLILESVAAELHALSWMTVSPAYLERRTALPCHCDMVLRLRRLLHFADKELSQS
RRTEKTQV
NT seq
5967 nt
NT seq
+upstream
nt +downstream
nt
atgtggacaaatgttttcaaaattggaggttttcgtcagatatcgtggttccagtttctc
cctcatgagtctgatctcaacccgctgcctgacaaaagcacaaagttggagcagaaagat
gctgctactctactggtgctttcatcccatctgcagttgcagaaggaaggatttctcagt
gcatggacgaattcctttgttgggccttgggatccttctcagggtgtccacaatccagat
gagaaaatcaagctctggcttttccttcctgggcgttatgcatctgttatagagtttgct
caggctgctgtgtctagattaagagttgttgcatctggggtctggttggctcctggagat
tcagaggaggttgcatctgctctatctcaggctttaaggaatcgaatagaaagagccctg
aatggactttcctacatgaggtttggtgatgcattttcgaagtaccaacccttttcacaa
agtgaagaacttttcaggagaggacagcctgtggttgagttcatctttgctgctactgaa
gaggcaatttttgtccacgttctaatatctgcgaagcatatccgggcgctttcaagcagt
gacatggagaaaatacagaatgatgcttcccattattctggtgacaggcttccagtaatt
accgcacctcatggaatgcgtggtagggtttctgcgttttgtccaagtgacctcgtgaag
caagtctatttaagttccggcaagtttaggacttcaaatggaattgtcggtttgcagcgc
gatgtttctcaggtttctggtagccacctcaaagggcaaagttgttatgttgaagttacc
cttggtttcccctctactggagataatgatgctcataactcgaatttaaaaaagagttta
ctcaagcatcatgacaccgaatcctctgcagtggcaagtggtatccagaagggattgcat
gatcaattttcagtttctgaaaggacattcatctacccagtagaggcagtgattgtccca
gtcttgcagacgtcatttgctagatcttctctgaaaagattctggatgcaaaattggata
gggccatcattatctggttcaccattccttatgccctgtgttggagagagagattctgca
gatggatcttggactaaagccaatggaatccgctcagaacaagattatcatagcagcagc
aatagtattagtagtagcatcagcagcattagtggcacctctagtgatagcgattgccag
atggctgcaggagttggcgagctcgatgcagatgctgactcattgacaagtagacagtca
ggtttatcttcatatgagtttccaaataatggctccaaatcgggttccaagcgtccaaga
gcaggtataggtgagacttttggccaagcagccctggttacaaatggtcctatccaagac
gcatataagtctgattacggctctcttgaagttagcaattcatctataactggagttgca
aatgatgtcggatctcattgggattgggaggatgataacagaggcatggatatccaagca
cttctctctgagtttggtgattttggtgacttctttgaaaatgatgctttgcccttcggg
gagcccccaggaactgcagagtcccaggctcttatgttttccattccagatagtggtgat
ctgggtagcagtcctaacaccggcatcatggatgctgcagatcagatgcttttacctgta
ggctttccatccttcgacaattttaatcagccttcagtagccacggaggagattccaagc
aaaaatcaagaagttgtgaagaatgccgtgtcttcagttgcagttggcacaactccagca
tcctctgttggtgagtttgaccatttggtgaaagctgaagcactgatgacatttgctcca
gaatatggagctattgaaattgtaactagtgagttctcgacatcgattttcagtaacccg
tacattccaaagtctcgaaaagttgagagtacaaattcgagtccggaaagttacgtgtat
agtgcaacaccgccttcatctccttgcttagatggatctgatgagaagcatggcgtagct
gtgatgtcaaaagcatgttccaacaggcaggattctagtacctctctccatccaaagaca
tattatactgctgttgaacgcgggaaagaacacgataaaagactcattgcttgcaacaat
agcgttgcgacacacggtgtggcaccgccgtcttcactctctgggttcaattccaccaac
gctgtcaaatctggactgaaaacaaatgaagcaacagtcgaaccggataattttctcatg
tctacaagaactgtgcttgccacagaagttgaatgccttatgttccaagcttctatgtgc
aggattcgacataccctgatatcatcttgtagccctccgcccatggggtcaattaggttg
gctggaaattcttttctgaatcaggtgcactgtgaaccgaacactggaacaggaattgtt
tttagcaagtatgaggtgaaaaagaaggactctattccagttagaatcgctggggatatt
gatagtggactgctagaagggccacttaatgcacccgtgggtgtttggcgctctgttgca
gttcctaaagttacaaaaccttcgatgtcacctagtatggaaatttgcccatccttgcct
tctcattcgtccgaggaaggtatactatcttatgggcagaggcaaccacttcaggaattc
cttgacggtttggcattacttgttcaacaagctacctcattcgttgatgtggcgcttgat
gctgattgtggtgatggcccttatggttggcttgcattacaagagcaatggaggcgcgga
ttagcttgtggaccttccatggttcatgctggttgtggagggagtttggcttcttgtcat
tcattggacatcgctggcgtagaactagtggatccactgttagctgatgttcatgcatca
tctgtgattggattgctgcagtcagacatcaaaacagctttgagatcttcttttggctct
ttggatggcccattgtctgtcactgaatggtgcaaaggccgttcaggtgatgcaggaact
gtgggtgatggatttgcctctgaactcactggaggtgaatgtagagattcttcaagtact
gtaactttacctgtgggtgaacagctaagcccatcccaatcttctcttggcgtcaagggt
ggaggtagggtggaagagacaagccagtggagatcaaaccaagaaaccagtgcatcagag
tcagagcagcaattgggtttccgtcgcaggccaacattgtttgtgcttccagcgcctgct
ctacttgtagggtaccaggatgattggctcaagacatcagcaagctctctgcagctctgg
gaaaaggctcctcttgaaccatatgctctgcagaaacatatgacttactgtgtcatatgt
ccagacattgatccccttactaccgccgctgctgacttttttcaacaacttagtactgtc
tatgagacatgcaaactgggaactcattcacctcaaagcttgggaaaccatatggaggtg
gattctggaaaatggtcatcatctggttttattctacttgactgccctcaatcaatgaag
atagaaagcagcactgcatctcttgttggatcaattagtgattattttctgtccctgtcc
aatggttgggatttgacgagctttctgaagtctctctcaaaggttcttaaggctctaaat
cttgattcatgctttgcctcgaacccaaaggaaggaagtacaggtccttgtacggttatc
tatgtggtttgtcccttccctgagcctgttgcagtcctgcagactgtcatcgagtcttcc
attgctgttggatcaatcattctgtcgaaagataaagagaaaagatccataatccacagt
caggttgggaagtccttgagttgctcggcatctgtggatgaagcatcaatatcaaatgtg
ttgacacttccaggattctgtattcctaaattggtccttcagattgtaacagttgatgcc
atttttagggtcacaaatccagctctcaatgagctcgtcattctgaaggagatttctttt
actgtttacaataaagctaggagaatttcacgaggatcctccacctccaccactgacgtg
gtccaatcttcttctatgtcaagtagatctcattcggcttcgatgcaaatgacatctcca
atctcagggatgtggaaggagtgtattggtcctagaataacaggtccaagagagagtgaa
cttgatcctaccttgcgccatggttcttgggataataacaattggcaatcgtcaagagca
gctggcggttttgggattgatccacatagaactggagattttcttattcaagatgagatt
cgttatatgtttgaaccactatttattattgcggaacctggttcactggagcatggagtc
tcaccaacaatttttgctaacatagcatcggaaacttcaaagccttctctatcggatgat
tgtactagtgggagcattgtgcagagttcagtagattctactggaccatgctcccaatct
gatggatcggagggggcagaaggctttggatcttctggccaccaaaagacacttcctact
ctacactgttgctatggatggacagaagattggcgttggctagtatgtgtatggaccgat
tctaggggagagttgctcgacagccatgtattcccctttggtggaattagtagtaggcag
gatacaaaaggcctgcaatacctttttgtccaactgctgcatcaaggctgccaaattctt
cagtcgtgctcttctcctgactctggtgttgtcgtcaagccaagagattttgtgattaca
cgcattggatgtttctatgaacttgagtaccaagaatggcagaaagcactctattctgtt
gggggttgcgaggtgaaaaaatggcctctgcaattacggcgatctgcacctgatgggatg
ctaggaagcagtaatgggacctcattgcagcaggaacaggagatgactttaattcaagag
agaacccttccttcttcgcctagtcctatatacagtggtcactcaaaagcatctggtttt
gtaaagggtggtggtctgggacagtcctcaggtagaaagcagctgatgggtgggcctcca
gtcatagaccaccctaggggtatgcttcagtgtgtgcaaagcatcagtttcatctcaatt
tcagtcgaccattcattacatctggttttccaagctgattcagcatctcctgggactact
cagggtagcaccagcactgtgaacgtgtcaggtggttatattgaagggttcactccggtg
aagtctcttggttcggcatccacatcttatgttctaatcccttcacccagcatgcgattc
cttcccccaactccgctgcaactccccacatgcctcaccgccgaatcccctccacttgcc
catctcctacacagcaaaggctctgcgattcccctttccacaggattcgtggtatccaaa
gctgtaccttctatggggatggggaacgactcctcaaggaggagcaactcctcgaaagaa
gaagaatggccttcagttatttccgttagtcttgttgatcattacggaaatggaagtaat
aacagcggtaatactcaggagaaaactaaaagagggattgttaggggctcagaagccaga
gattttgaaatagaaacccatttgatacttgagtctgtagcagcagaacttcatgctcta
tcgtggatgactgtgagccccgcttacttggaaaggcgaaccgcgctgccctgccactgc
gacatggttttgagactcagaaggcttcttcattttgccgataaagagctctcacagtcg
aggcgcacagaaaagacacaagtctag
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