Rhododendron vialii: 131320802
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Entry
131320802 CDS
T09330
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
rvl
Rhododendron vialii
Pathway
rvl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
131320802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rvl03021
]
131320802
Enzymes [BR:
rvl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
131320802
Transcription machinery [BR:
rvl03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
131320802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
131320802
NCBI-ProteinID:
XP_058207682
LinkDB
All DBs
Position
1a:41461282..41485857
Genome browser
AA seq
1454 aa
AA seq
DB search
MAKKPRDGIQFTKQPYIEDVGPRKIKSIQFSMFSESDIFKCAEVEVHLGRYYDDQRLPFQ
HGLLDPRMGPPNKNSVCATCHGNFKDCPGHYGYLALALPVYNVGYLNTIVDILKCICKSC
SRVLLPEKERVEFLKKIRNPKLEPLRKSEILKRIVKRCNSMASSRKAVKCSRCGYINGMV
KKATGNSTLGVNVDRSPIVENGLEECRSAISHTKESRASISMGNMLNPDRVLSLFKKMLD
EDCELLYLSDRPENLVLRNIAVPPLALRPSVFVDGGTRSNESDITERLKRIIQANAILQQ
ELSDIISTTRNSNGWAELQMEVAQYINSDVRGGVNMQATKPLSGFVQRLKGKQGRFRGNL
SGKRVEYTGRTVISPDPNLKITEVAIPLLMARTLTYPERVSHHNIEKLRQCVRNGPNKYP
GARFLRTEGALVNLMVPARKRLADELKFGQIVDRHLEDGDIVLFNRQPSLHRMSIMCHRA
RIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEIL
VASTQDFLTSSFLITRKDTFYDRAAFSLLCSYMGDGMDLVDLPTPALVKPIELWTGKQLF
SVLLRPHANMRVYVNLTVREKNYSKSGETMCPNDGFVYFRNSELICGQLGKATLGNGNKD
GLYSILLRDYNAYAAAACMNKLAKLSARWIGNHGFSIGIDDVQPGGRLNENKRARILEGY
GKCDELIQSYNKGMLKLQPGCDAAQTLEAQISSFLNNIRETTAKVCMEELHWRNSPLIMS
QCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYSG
LTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNTVRNASGAIVQFI
YGDDGMDPSQMEGKGGIPLNFERLFMKVKATCPAGEQKSLSPSEIIEQSNNRLSERDMTP
DGGCSDAFKTSLAEFIQECNTRLRSTRKALKLDDEQVEEENRNILENVAQNISGVTSKQL
QVFSETCISRYHLKRVESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK
EIINASKKISTPIITAPLDRNDNLKTARMVKGRVEKTLLGQVAKSVRIVMTSRSASIVIT
LNMESIQASQLCINSQHVKESILRTPKIKLKEPNIKVLDARKLEIIPPADKSELHFELHS
LRNKLPLVVVKGVNSVERAVINRTKVDNKEQYNLLVEGTGLQDVMGTEGINGRKTTSNHV
MEVQQVIGIEAARRCIIEEIKYTMASHGMTIDLRHMMLLADLMTFKGEVLGITRYGIQKM
KESVLMLASFEKTADHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGILKVMQRYVKHLV
GKGKYMRNSTCTNFSMYVLHQLHEFSPAKCLSLPIARPRDTSPKVEHDAYENLTQYFLKE
DDRGQESHDAKVWG
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaagccacgggacggcattcagttcacaaagcagccctacatcgaggacgtc
gggcctcgtaaaataaagagcattcagttctccatgttttcggaatctgacatcttcaag
tgcgccgaggttgaagtgcatcttggccgctactacgacgatcaaagattgccatttcaa
catggcttgctggaccctcgcatggggccaccaaacaagaacagtgtttgtgcaacttgc
catgggaattttaaggattgtcctgggcactatggatacttggctcttgccctccccgta
tataacgttggctatctgaatactattgtggacatcttgaagtgcatttgcaagtcttgc
tcccgtgtactcttgccggagaaagagcgtgtggagtttttgaagaagattagaaacccc
aagttggaacccctaaggaagagtgagattttgaaaaggatcgtgaaaaggtgtaatagc
atggcaagcagtaggaaggcggtgaagtgttcaagatgcggatatattaacggaatggtg
aaaaaggctaccggtaatagtacgttgggggtcaatgttgatcgttctccaattgttgaa
aatggtttagaagaatgcagatcagctatttctcacacaaaagagtccagggcatccatt
agcatgggaaacatgctaaacccagatagagtcctgtccctttttaagaagatgctggat
gaggattgcgagttgctttatttgagtgatagacctgagaaccttgttctaaggaatatc
gcagtgccacctttagctcttcgtccttctgtttttgttgacggtggaacacggagcaac
gaaagtgacatcacagagaggttaaaacggattattcaagcaaatgctatcctacagcag
gaattatcagacataatctccactacgagaaattcgaacggttgggctgaactgcaaatg
gaggttgcacagtacataaatagtgatgtacgcggtggtgtcaatatgcaagctacaaag
cctttgagtggttttgttcagcgcctaaaagggaaacagggacgtttccgagggaacttg
tctggaaagcgtgttgagtatactggaaggaccgtgatatcccctgatcctaacctgaag
attactgaggttgcaattcctctgttgatggctcggaccctaacttatccggagcgtgtt
tcccatcacaatatagagaagttgagacagtgtgtccggaatgggccaaataaataccct
ggtgctaggttcctcagaactgagggcgccttggtgaatttgatggtccctgctagaaag
cgccttgctgatgaattgaaatttggtcaaatagttgaccgacatttggaagatggggac
attgttctttttaacagacaaccaagcttgcatcggatgtcaatcatgtgccatagggca
aggataatgccttggcgtactttaagattcaatgaatcggtttgcaatccatacaatgct
gattttgatggtgatgagatgaatttgcatgtcccacaaacagaggaggctcgcacggag
gctcttatgctgatgggggtgcaaaacaacctatgtacaccaaaaaatggagagattttg
gttgcttccacacaagattttttgacgtcttccttcctcataacaaggaaagacacattt
tatgaccgtgctgcgttttccctcttgtgttcttatatgggggatgggatggatcttgtt
gacttgcctacaccagcattagttaagccgatagagctttggactgggaaacaattattt
agtgttctgttgcgcccacatgcaaatatgagagtttatgtcaatctcaccgttagggaa
aagaattatagcaagtctggagagacaatgtgtcctaatgatgggtttgtttatttccgt
aatagtgagctaatatgtgggcaactagggaaggctactttaggaaatggcaacaaggat
ggtctttactctatacttcttagggactacaatgcatatgccgctgcagcttgcatgaat
aaattagcaaaactgagtgctcggtggattgggaatcacgggttctcaattggaattgat
gatgtccaaccaggaggacggttgaatgaaaacaaaagggctagaattttggaagggtac
gggaaatgtgatgagctcatacagtcctataacaaaggaatgctgaaacttcaacctggt
tgtgatgctgctcaaacactagaagctcagataagcagttttttaaataatattcgagaa
acaactgcaaaagtttgtatggaagaactacattggaggaatagccccttgattatgtca
cagtgtggttccaaaggatctcctatcaatataagtcagatgattgcatgtgttgggcag
caatcagtagggggtcgtcgtgctccgaatggatttattgatagaagccttcctcatttc
cctagaaaatcgaagacccctgctgctaaaggattcgttgcgaactcattctacagtggt
ttaacggctactgaatttttcttccatacgatgggagggcgagaaggtcttgtggataca
gcggttaaaacagctgatacagggtatatgtctcgtagactgattaaagctttggaggac
ctttccatccaatatgataacacagtacgaaatgctagcggagctatagttcagttcatt
tatggcgatgatggtatggatccatcacaaatggaagggaagggtggaattcccttgaac
tttgaaagattatttatgaaagtcaaggctacatgtcctgctggagaacaaaaaagtttg
tctccttctgaaatcatcgaacagagtaataacaggctgtcagaacgtgacatgactcct
gatgggggttgttctgatgcattcaagacgtcgttagctgagttcattcaggaatgcaat
acaagattgaggagcacgagaaaagcactgaaattggatgatgagcaagttgaggaagaa
aatcgcaatatccttgaaaatgttgctcaaaatatatccggtgttacttccaagcagcta
caggttttctctgaaacttgcatttcccgttatcacttaaagagagtagaatctggaact
gcaattggtgcaattggagctcaaagtattggagagccagggacacagatgactttaaag
actttccattttgctggagttgcaagcatgaatgtcacacttggagttcctcgtataaag
gaaattattaatgcttccaaaaaaatcagcacaccaatcattactgctcctcttgatagg
aatgataatttgaaaacagcaagaatggtcaagggtcgtgtggaaaaaacgcttctaggc
caggttgcgaaaagtgtaaggattgtaatgacatcgaggtcagcatccattgtaatcacc
ctgaacatggaaagtattcaagcttctcaactttgcataaactcacagcatgtaaaggaa
tctatattgagaacaccaaagatcaaattaaaggaaccgaatattaaggtcttggatgct
aggaaactggaaattattcctccagctgataaaagtgaacttcattttgaacttcactca
ctaagaaataagcttccattggttgttgtgaagggtgtaaacagtgtagaacgtgcagtg
attaatagaactaaagtggacaacaaagaacaatacaacttacttgtggagggcacggga
cttcaagatgtcatgggcactgaaggaattaatgggcgtaaaacgaccagtaatcatgtt
atggaagtgcagcaagtcatcggaattgaagctgcaagaaggtgtataattgaagagata
aaatacacgatggcaagtcatggaatgaccatagatctacgacatatgatgcttttggca
gatctaatgacatttaagggcgaagttctcggaatcactagatatgggattcagaaaatg
aaagagagtgtactgatgttggcttcatttgagaagacagctgatcaccttttcaatgct
tctgtgaatgggagagatgacaagattgaaggagttagtgaatgcatcattatgggcata
ccaatgcagataggcactggaatacttaaagtgatgcaaaggtatgtgaaacatttggta
ggcaagggaaaatatatgcgtaacagtacgtgtacaaatttttctatgtatgttctccat
cagttgcatgagttttctcctgctaaatgcttgtccttacccatcgctagaccacgggat
acttcccctaaagtagaacacgatgcatatgaaaatctaacacaatacttcttaaaggag
gatgatagagggcaggaaagtcatgacgctaaagtttgggggtaa
DBGET
integrated database retrieval system
