Rhododendron vialii: 131320834
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Entry
131320834 CDS
T09330
Name
(RefSeq) ABC transporter B family member 20-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rvl
Rhododendron vialii
Pathway
rvl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
131320834
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rvl02000
]
131320834
04147 Exosome [BR:
rvl04147
]
131320834
04090 CD molecules [BR:
rvl04090
]
131320834
Enzymes [BR:
rvl01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
131320834
Transporters [BR:
rvl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
131320834
Exosome [BR:
rvl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
131320834
CD molecules [BR:
rvl04090
]
Proteins
131320834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_15
Zeta_toxin
AAA_16
RsgA_GTPase
HupE_UreJ
AAA_30
DUF87
Motif
Other DBs
NCBI-GeneID:
131320834
NCBI-ProteinID:
XP_058207700
LinkDB
All DBs
Position
3a:complement(18680021..18697481)
Genome browser
AA seq
1406 aa
AA seq
DB search
MMINRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDTSAEPVPIEVEEEIDDGDEIEPPP
AAVPFSRLFACADRLDWVLMVVGSLAAAAHGTALVVYLHYFAKIIHLLVHDRPDTRDVPD
TRDVLLSDFYDLTLTIVYIAVGVFAFGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSF
FDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIGFFNCWQIALITLAT
GPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSL
QATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHGRAHGGEVITALFAVILS
GLGLNQAATNFYSFEQGRIAAYRLFEMISRSSSSVNHDGITLPSVQGNIEFRNVYFSYLS
RPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKL
EWLRSQIGLVTQEPALLSLSIRDNIAYGRSDATLDQIEEAAKIAHAHTFISSLGRGYETQ
VGRAGIALTEEQKIKLSVARAVLSNPSILLLDEVTGGLDFEAERSVQEALDLLMLGRSTI
IIARRLSLIRNADYIAVMEEGQLVEMGTHDELITLDGLYAELLKCEEAAKLPRRMPIRNY
KETAAFQVEKDSSAGQSLQEPSSPKMAKSPSLQRVSAVHVFRPPDVGFNSQESPRVRSPP
SEQMVENGIPLVVMDKEPSIRRQDSFEMRLPDLPKIDVPSGNKQTCNSSDPESPVSPLLT
SDPKNERSHSQTFSRPHSQYDDSPVKTKETGDSRHRKEPSLWRLVELSLAEWLYAVLGST
GAAIFGSFNPLLAYVIALVVTAYYREDHHLHQEVNKWCLIITCMGIVTVVANFLQHFYFG
IMGEKMTERVRRMMFSAMLRNEVGWFDEEDNSADTLSMRLANDATFVRAAFSNRLSIFIQ
DSAAVAVAVVIGMFLHWRLALVALATLPILTVSAIAQKLWLAGFSKGIQEMHRKASLVLE
DAVRNIYTVVAFCAGNKVMELYRWQLHKIFKQSFLQGMAIGFGFGFSQFLLFGCNALLLW
YTRYSVKNGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKI
DPDDNSALKPPNVYGSIELKNIDFSYPTRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKST
IISLIERFYDPVAGQVLLDGRDLKLFNLRWLRSHMGLVQQEPIIFSTTIRENIIYARHNA
SEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLD
EASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGSHDS
LMAKNGLYVRLMQPHFGKGLRQHRLI
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgatgataaacaggggtctattcgggtggtccccgccgcacatacaacctctcacaccg
gtctccgaggtctccgagccgcccgaatccccgtcaccatacctcgacaccagcgccgag
ccggtccccatcgaggtggaggaggagatcgacgacggggacgagatcgagccgcccccg
gccgccgtccccttctccaggctcttcgcatgcgccgatcgcctagattgggtcctgatg
gtcgtcggatcgctggccgccgccgctcacggcaccgcgttggtggtctacttgcattac
ttcgccaagatcatccatttgctggtgcacgaccgtccggacacgagggatgttccggac
acgcgggatgttctgttgagtgacttctatgaccttactttgaccattgtctatattgcc
gtgggtgtttttgcctttgggtggatagaggtttcatgctggattcttactggagaaagg
cagactgctgtgatcaggtcgaaatatgttcaagtattgctaaatcaggacatgagtttt
tttgatacatatgggaataatggagatatagttagccaagtgttgagtgatgtgctgctc
atccagtctgctcttagtgaaaaagttggaaattatattcataacatggccaccttcttt
agtggccttgtcattggatttttcaactgctggcagatcgccctcattactttagccact
ggtccatttattgttgctgcgggaggaatatcaaatatatttctccacaggcttgctgag
aatattcaagatgcctacgctgaagcagcaagcattgctgagcaggcagtttcctatatc
agaacgttgtatgcatttacgaatgaaacgttggccaagtactcttatgcaacttcactg
caagcaacactgaggtatggtatattgattagtctggtgcaaggactaggtctcgggttt
acatatgggcttgcaatctgttcttgtgccttacaactttgggttggaaggttcctggtt
actcatgggagagcccatgggggtgaagttataacagccctgtttgctgtaattttgagt
ggcctaggactgaatcaagcagcaacaaatttctactcttttgagcaagggagaattgct
gcatacagactctttgagatgataagccgttcatcctcttctgttaatcatgatgggatt
actctaccatctgttcaaggaaacattgaattccggaatgtatatttcagctatctctca
cgtccggaaattcctatcttaagtggcttctacctcactgtgcctgctaaaaaggcagtg
gcgcttgttggcagaaatggctcgggaaaaagcagtattataccgcttatggaacggttt
tatgatcctacattaggagaagttcttttggatggagagaatataaagaacctcaaattg
gagtggcttagaagtcaaattggtttagtcactcaagaacctgcactactgagtcttagt
atcagagacaacattgcttatgggaggtctgacgctactttggatcagattgaggaagct
gctaaaatagctcatgcacatacatttatcagctcacttgggagaggctatgagacacag
gtgggtagggctggcatagcattgacagaagagcagaaaattaaactctctgttgccagg
gcagtgctttcgaatccgtctattcttcttcttgatgaggtaactggtggacttgatttt
gaagcggaaagatctgttcaggaggctctagatctcctcatgttaggccgatctactatc
atcattgctcggcggcttagtctcataaggaatgctgactatatagcagtgatggaagag
ggtcagctagttgaaatgggcacacatgatgaactaataaccttggatggcttatatgca
gagctcctcaaatgtgaagaagcagcaaaacttccacgcaggatgccaataaggaactac
aaggaaactgcagcttttcaagttgaaaaagattcatcagctggtcaaagcctgcaagaa
ccatcatctcctaaaatggccaaatcaccatctcttcagagggtttctgctgtccatgta
ttccggcctccagatgttggatttaattcacaagaatctccaagggttcgtagcccacct
tcggaacaaatggtggaaaacggcatccctttggttgttatggataaggaaccatctata
agaaggcaggatagttttgaaatgagacttcctgacttacccaaaattgacgttccgtct
gggaataaacaaacatgcaattcttctgatcctgaatctcctgtctcaccgctgttgaca
tctgatcccaaaaatgaacgctctcattcacaaactttcagtcgaccacatagccagtac
gatgactcaccagtgaaaacgaaggaaacaggggattcacggcatcgaaaagagccttct
ctttggaggcttgtagagcttagcttagcagagtggctttatgctgttttagggagcact
ggtgctgccatctttggttcatttaatccactccttgcctatgtgattgcactggtagtt
acagcatactacagagaagatcatcatcttcatcaggaagtaaacaagtggtgcttaatt
attacatgtatgggtattgtgacagtggttgctaatttcctgcagcacttctactttggt
ataatgggggagaagatgaccgaacgagtgaggagaatgatgttctcagcaatgttgcgc
aatgaagttggatggtttgatgaagaggataacagtgctgacaccttatccatgcgttta
gcaaatgatgcaacatttgtgagagctgcttttagcaatcgactttctattttcatacaa
gacagtgcggctgttgcggttgctgttgttatcgggatgtttctacattggcgattggca
ctagttgctttggcaacgctacctattcttactgtctcggctattgcacagaagttatgg
cttgctgggttctctaagggcatacaagagatgcacagaaaggcttctttggttcttgaa
gatgccgttagaaacatttacactgttgtagcattctgtgctggtaacaaggttatggag
ctctacaggtggcaacttcacaagatattcaagcagagcttccttcaagggatggctatt
ggtttcggatttggcttttcacagtttcttctctttggctgcaacgctcttcttctctgg
tacactcgttactctgttaaaaacggctatatggatctgcctacggctctcaaggagtac
atggtgttctcttttgcaacatttgcacttgtggagccttttggcttggctccctatata
ctgaagcggcggaaatctcttatttcagtatttgagatcatagacagagtgcccaagatt
gaccccgatgataactcggcattgaagcctcctaatgtttatggaagcattgagttaaaa
aatatcgacttctcatacccaactcgcccggaagtgttggtactgagtaattttagtctg
aaagtcaacggtggtcaaaccgttgccgtggtgggcgtctctgggtcaggaaagagcact
ataatatctttgatagagagattctatgacccggttgccggtcaggttttactagatggt
cgagatttgaaacttttcaacttgaggtggttgaggagtcacatgggtcttgttcagcag
gaacccattatcttctcaacaactataagggaaaacatcatctacgcgaggcacaacgcc
agtgaagcggagatgaaggaggcagcaagaatagcaaatgcccaccatttcatcagtagc
ctccctcacggttatgatacgcacgttgggatgaggggcgtagatcttaccccaggacag
aagcagagaattgcaatcgctcgtgtggtgttgaaaaacgcacctattttgctattggac
gaggcgagttcatcgatcgagtctgagtctagccgagtggtgcaggaggctcttgataca
ctcatcatggggaataaaacgacgatattaatagcccatagagcagctatgatgaggcac
gtagacaacattgtagttcttaatggagggcgaatagtagaggaagggtcccacgattcc
ttgatggcgaagaatggtttatatgtccggttgatgcaaccacactttgggaagggcttg
cgtcagcatagactcatatag
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