Rhododendron vialii: 131320909
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Entry
131320909 CDS
T09330
Name
(RefSeq) lysine--tRNA ligase, cytoplasmic-like isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
rvl
Rhododendron vialii
Pathway
rvl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
131320909
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rvl01007
]
131320909
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rvl03016
]
131320909
Enzymes [BR:
rvl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
131320909
Amino acid related enzymes [BR:
rvl01007
]
Aminoacyl-tRNA synthetase
Class II (A)
131320909
Transfer RNA biogenesis [BR:
rvl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
131320909
Prokaryotic type
Other AARSs
131320909
BRITE hierarchy
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GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Peptidase_S46
Motif
Other DBs
NCBI-GeneID:
131320909
NCBI-ProteinID:
XP_058207799
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Position
3a:35603962..35612455
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AA seq
567 aa
AA seq
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MSKSKVQKPQAADDEEMDPTQYFENRVKTLGALKSAGINPYPHKFHVSTSIPEYIEKYKS
LADGEHLEDVEVSLAGRIMGKRSSSAGLLFYDLHGNAAKVQVFASKSVTKLDEAEFSKLH
SGVKRGDVVGVIGYPGRTKRGELSIYPRLFMPLSHCLHMMPRKKAGPGVEIANVNDIWVP
GNARNPDTYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKIVSYIRSFLNNLDFLEVETP
MMNMIAGGAAARPFVTHHNDLNMKLYMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDL
THNPEFTTCEFYMAFADYNDLMELTEKMLSGMVKELTGGYKVKYHANGLESDLIEIDFTP
PFRRIDMIEELEKMCNLSIPKDLSSDEANKYLADACMKFDVRCRPPLTTARLLDKLVGHF
LEETCVNPTFIINHPEIMSPLAKWHRAKPGLTERFELFINKHELCNAYTELNDPVVQRQR
FADQLKDRQSGDDEAMVLDETFCTALEYGLPPTGGWGLGIDRLTMILTDSQNIKEVLLFP
AMKPQDEPPSKVTTAVNSESLISSLAI
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagtccaaggttcagaagccccaagcggcagatgacgaggaaatggatccaaca
caatattttgaaaatagggtgaaaacccttggagctctgaagagtgctggaattaatccc
tatcctcacaaattccatgtttcaacgtccatccctgaatatatagagaagtataaaagc
ctagctgatggggagcatcttgaggatgttgaagtatctttggctgggagaatcatgggc
aagcgatcttcttcagcagggttgctcttttatgatttgcatggtaatgctgccaaagtc
caagtttttgccagtaaaagcgttacgaaattggatgaagctgaattttccaagctccac
tcgggtgtgaagcgtggagatgttgttggtgttattgggtatccagggagaactaaaagg
ggagagctgagtatttacccacgattgttcatgccattatcccattgtcttcatatgatg
ccaaggaaaaaagctggtcctggtgtggaaattgctaatgtaaatgacatatgggtccct
ggtaatgcgaggaatccagacacttacatattaaaggatcaggaaactcgatatcgtcaa
cgttacttggatttgatgttgaacttggaggttcgacaaatattcaagactcgagcaaag
attgtctcatatatccgaagctttctcaacaatcttgatttcttggaggttgaaacacca
atgatgaacatgattgctgggggagcggctgcccgtccttttgtgacccaccacaatgac
ttgaacatgaagctgtacatgcggattgcacctgaactatatcttaaggagctagttgtt
ggtggactggaccgtgtttatgagataggaaaacaatttaggaatgaaggaattgacttg
acacataatcctgagttcactacatgtgagttttatatggcatttgctgactataatgac
ttgatggagctcacagagaaaatgttgagcgggatggtcaaggaacttactggtggctat
aaagttaaatatcatgcaaatgggttagagagtgacctgattgagatcgatttcactccc
cctttcaggaggattgatatgatcgaagagttggagaaaatgtgtaatctaagcattccc
aaggatctttcaagtgatgaagctaacaagtatttggcagatgcatgcatgaaatttgat
gtcagatgtcgtcctcccctgacaacagctcgtctcttggacaaacttgtaggacacttc
ctggaggagacgtgtgtaaatcctactttcattattaaccatccagagattatgagtcca
ttagcaaagtggcatagggctaagccaggcctgactgaacgctttgaactatttatcaac
aagcatgaactttgcaatgcatatacggagttgaatgatccagtggtacaacgccaacgg
tttgcggaccaactcaaggaccgacaatcaggcgatgatgaagctatggtcttggatgaa
acattttgtacggctcttgagtacggtttgcccccgactggcggttggggattgggtatt
gaccgacttacaatgatattgaccgattcacagaacatcaaggaagttctactctttccg
gccatgaaaccacaggatgaaccgccttccaaagtgacaacggcggtgaattctgaatca
ttgatatcatctctggctatttga
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