KEGG   Rhododendron vialii: 131321025
Entry
131321025         CDS       T09330                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
rvl  Rhododendron vialii
Pathway
rvl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131321025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rvl03041]
    131321025
Spliceosome [BR:rvl03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    131321025
 Complex B
    131321025
 Complex C
   U2 SnRNP specific factors
    131321025
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin MBDa
Other DBs
NCBI-GeneID: 131321025
NCBI-ProteinID: XP_058208003
LinkDB
Position
3a:complement(11998289..12002139)
AA seq 810 aa
MLGTLPILPLPAPPTDGNLGPLPASQVSEHSDDEMKIETEDQNNVDSVPASVATHTRTIG
IIHPPPDIRNIVDKTAQFVSKNGPEFEKRIIANNTGNAKFNFLNASDPYHAYYQHRLSEF
RAQNQNQPSSDPADPSLPESIPSAAVTEGDETITKPDPSAQFRPVRKVLESPEAELYTVR
LPEGITGEELDIIKLTAQFVARNGKSFLAGLTSREMNHQQFQFLKPTHSMFMFFTSLADA
YSKVLMPPDGLSRLTEKLRKSVTDMTTVLERCLHRLEWERSQEQARQKAEDEIEQERLQM
AMIDWHDFVVVETIDFADDEDEELPAPMTIEEVIRRSKVSAMAEEEDNVEPGKVVEMEMD
EEEVKLVEEGMRAASIEENGEEKKNEMKMLPLEEQEQPMRIVKNWKRPEERIASERDPTK
YVVSPITGELIPIIEMSEHMRISLIDPKYKEQKERMFAKLRETTLAQDDEISKNIMGLAR
TRPDIFGTTEEEVSNAVKAEIEKKKDEQPKQVIWDGHSGSIGRTATQAMSQNPNGEDQND
PANNELRNLPGPTAPPPLRPGVPSIRPLPPPVGLALNLPRVPPNVQYSTTNSGAMLMQQP
LPRPPPVNMIPSARPPPPPPMQLISGQQQFLVNRQPPMPPTISVNPPSIPVPPPPGYTPL
SAPRPYVPLTVPQPGMHMVQPPPPPLPEEAPPPLPEEPEPKKQRLDDSVLIPEDQFLAQH
PGPVRITVSVPNVDEGNLKGQVLEITVQSLSETVGSLKEKIAGEVQLPSNKQKLSGKAGF
LKDNLSLAYYNVAEGETLALSLRERGGRKR
NT seq 2433 nt   +upstreamnt  +downstreamnt
atgctgggaacgctgccgatattacctcttccggcgccaccaactgatggcaatctcggc
cctcttcccgcttcccaagtttcggaacactctgatgatgagatgaaaattgagaccgag
gatcagaataacgtcgattctgttcccgcatcggttgcaacccatactagaacgatcgga
attatacatcctccaccagacattaggaacattgttgataaaactgcacagtttgtttca
aagaatggacctgagtttgagaaaaggatcattgcaaacaatactggcaatgctaagttt
aatttcttgaatgcctctgatccttaccacgcttactaccagcaccgtctatctgaattt
cgtgctcaaaatcaaaaccagccttcttctgatcctgctgatccatctttgccggagtcc
atcccttctgctgctgttactgagggtgacgagacaatcactaaacctgacccctcagcc
caatttagacccgtgcgcaaagttcttgagtccccagaggctgagctgtacactgttagg
cttcccgaggggattacaggagaggaattagatattattaaattgactgcgcaattcgtg
gctcgcaacgggaagtctttcttagccggactcaccagcagagaaatgaaccaccaacaa
ttccaattcttgaagccaacccacagtatgttcatgtttttcacctctcttgctgatgca
tattcaaaagtattgatgcccccagatggattgagtcgattgactgagaagttgaggaag
agtgttacggatatgactactgtgcttgaacgttgcttgcaccggttggagtgggagagg
tcgcaagagcaagcaaggcagaaagctgaagatgagattgagcaggaacgtttgcagatg
gccatgatcgattggcatgattttgttgtggttgagactatagattttgcggatgatgaa
gatgaggagttgcctgccccaatgacgattgaagaggttataaggaggagcaaagtttca
gctatggcagaagaagaagataatgttgagccaggaaaggtggtggaaatggagatggat
gaagaagaggtgaagcttgttgaagaaggaatgagggcggctagtattgaagaaaacggt
gaagagaagaagaatgagatgaaaatgcttcctttggaagaacaggaacaacctatgaga
atcgtgaagaactggaagaggcctgaggaaaggattgcctcagaaagagatccgacaaaa
tatgttgtgtcaccaatcaccggcgagctaatacccattattgagatgtcagagcatatg
aggatttcccttattgaccctaagtacaaggagcagaaagagaggatgtttgctaagctt
cgggagactacccttgctcaagatgacgaaatttccaaaaacatcatgggactcgcccga
acgcgtcccgatatttttgggactacggaggaagaagtttctaatgctgtcaaggcggag
attgagaagaaaaaggatgagcaaccgaagcaagtcatatgggatggtcacagtgggagc
attgggcgcactgcaactcaagccatgtcacagaatcccaatggagaggaccaaaatgac
cctgcgaacaatgagttgaggaatcttccgggtcccacagcgccaccccctcttagacct
ggcgtgccatcaattaggccacttcctccgccagtaggattagccttgaatcttcctcgt
gtacctccaaatgtccagtattcaactactaatagtggtgcgatgctcatgcaacagcct
ctacccaggccaccaccagttaatatgatcccgtcagctcggccaccaccgccacctcca
atgcagttaatttctgggcaacaacagtttttggtgaataggcaacccccgatgccacca
acaatttctgttaatccgccaagtattcctgtgccgcctccacctggatatacacctctg
tcagctcctcggccttatgttccccttacggtgccgcaacctggcatgcatatggttcag
ccaccacctccaccactgcccgaggaagctcctccaccacttccagaagaaccagagcca
aaaaagcagaggcttgacgattccgtgcttattcctgaagaccagtttctcgctcaacat
ccgggacctgttcgcatcactgtttctgtgccaaatgtggatgaaggaaatctcaaaggg
caagtactggagattacagtgcaatccctatctgaaactgttggcagtctgaaagagaaa
attgcaggagaggtccagcttccttcaaacaagcagaagctgagtggaaaagctggtttt
cttaaggacaatttgtcgcttgcttattacaatgttgcagaaggagaaacacttgctctt
tctctaagagaacgtggtggtcggaagagatga

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