Rhododendron vialii: 131321041
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Entry
131321041 CDS
T09330
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
rvl
Rhododendron vialii
Pathway
rvl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131321041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131321041
04121 Ubiquitin system [BR:
rvl04121
]
131321041
03036 Chromosome and associated proteins [BR:
rvl03036
]
131321041
03400 DNA repair and recombination proteins [BR:
rvl03400
]
131321041
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
131321041
Ubiquitin system [BR:
rvl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
131321041
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
131321041
DNA repair and recombination proteins [BR:
rvl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
131321041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
BRCT_2
zf-C3HC4_2
zf-C3HC4_3
zf-RING_6
zf-HC5HC2H_2
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_4
Prok-RING_4
zf-RING_10
RTT107_BRCT_5
PTCB-BRCT
PHD_NSD
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
131321041
NCBI-ProteinID:
XP_058208044
LinkDB
All DBs
Position
1a:complement(45888999..45895533)
Genome browser
AA seq
722 aa
AA seq
DB search
MADASNNSSFLNPWLLHHQKLGLELKCPLCLNLLNRPQLLPCNHIFCDFCVPRSTQFGSE
CPVCKQQYAELDVRPAPYMENLVTIYRSWDASFGASLFPPLSSGAKRVSKELPSSLKTDD
DNKIKELFGTPQEGSSNGECQILLPTCKRVWAPLYHSAEEGNELTGKFDKSTPPINFVTD
QFKMGYVDRVVLRGGGNVWMRGAKQEELVTEELCINQELQSSPISPPSFDTKGIADDPGS
SNDSTGKIPAKRLLEDNYNKGEGELDRLSPGAGVDRARKVKRQRKHSNGLLKMGAPYTGC
TQPNIVHTGSLEISKLECGELSGVKDPTISDSNDASGSICAFCESSGVKDSTGPMLHYVN
GKEVVGNAATNSNVIHAHQICIEWTPQAYFVGETVKNLKAEVARAAKLKCSKCGLRGAGL
GCFVKSCRKSYHVPCAMEVLGCRWDFEDFLVLCPNHSSVKFPCEKSKSRKHASEEQDFAP
TEMIISKQPKVWEASRNGVKEWVFCASALSVEEKYLLVKFASTCGATVAKFWNPNVTHVI
AATDAEGACSRTLKVMKAILSGKWILKTSWIRACMEAMHPVDEEPYEVALDNHGCRNGPK
TGRLRALDNAPKLFNGLCFYFSGDFIPGYKENLLDLVTTAGGFVIESKTQLREQSQKPAS
QLTLIVYNNDPMQGCRLEEDGSVVLQRLETAENLAGETGSEVIPHTWLLESIAACKKAWN
QL
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgcttccaacaactccagctttctcaatccatggcttctccatcaccagaaa
ctgggtctcgagctcaagtgccctctctgcctaaatctgctcaaccggccacagctgctc
ccctgcaatcacatcttttgcgatttctgcgtaccgagatctacccagtttggatcggag
tgccccgtctgcaaacaacagtacgctgaacttgatgtaaggccagcaccttatatggaa
aatctagttaccatctatagaagttgggatgccagttttggtgctagtctgttcccgcct
ctttcttctggagctaaaagggtttctaaggaattgccttcttcccttaaaacagatgat
gataacaaaataaaggagttatttggaacacctcaagagggatctagcaatggggagtgc
caaattttattacctacttgtaaacgagtttgggctcctctttaccattctgctgaagaa
gggaatgagttgactgggaaatttgacaaatctacaccgccaatcaattttgtgacagat
caattcaagatgggctatgtggatcgagtggttttacgtggtgggggtaatgtttggatg
agaggtgcaaaacaagaagagcttgttacggaggaattatgtattaatcaagaattacaa
tcatcaccaatcagccctccttcatttgataccaaaggaatagctgatgatccagggagc
agcaatgatagtacaggaaaaatcccagccaagagattacttgaggacaactataataag
ggagaaggagaattggatagactctcacctggtgctggggtagatcgtgccaggaaagtt
aaaagacaaaggaaacatagcaatgggttgctcaagatgggtgcgccttacacaggctgc
actcaaccaaatatagttcacacaggaagtctggaaatatcaaaactggaatgcggagaa
ctgtctggtgtaaaggatccaacaatttcagattcaaatgatgcaagtggaagtatttgt
gcattttgcgagtcctctggagtcaaggatagtacggggcccatgttgcattatgtcaat
ggaaaggaagttgttggaaatgcagcaacaaactcaaatgttatacatgctcaccagata
tgcattgaatggacacctcaagcttattttgttggtgaaactgttaaaaatttgaaggca
gaagtagcaagagctgcaaagctgaagtgcagcaaatgtgggctaagaggagcaggtctt
ggttgctttgtgaaatcatgtcgcaaaagttatcacgtgccttgtgcgatggaagtcttg
ggttgtagatgggactttgaggactttctagtgttatgcccaaatcattcctcagtcaag
tttccctgtgagaagtccaagtccaggaagcatgcaagtgaagaacaggattttgcgcca
actgagatgataatctctaagcagcccaaggtatgggaagcctcacgtaatggagtgaaa
gaatgggttttctgtgcatctgctctgtcagtggaagaaaagtaccttttggtcaagttt
gcaagcacgtgtggtgcaactgtggccaagttttggaatccaaatgttacccacgtcatt
gctgccacagatgcagagggtgcatgtagcaggacattgaaagttatgaaggcaattttg
agtgggaaatggatccttaagactagctggatcagagcatgcatggaagcaatgcatcct
gtggatgaagaaccttatgaagttgctctagacaatcatggctgtcgtaatggccccaag
actggcagacttagggccttggataatgcaccaaagctcttcaatggattatgtttttac
ttcagcggcgactttatacctggttacaaggaaaatcttctagatttggttaccactgca
ggaggttttgttattgagagcaagacacaacttagagaacaaagtcagaaacctgcttca
cagttaactctaattgtctataacaatgaccccatgcaagggtgcagattggaagaggat
ggttctgttgtgcttcaaaggctagaaacagcagaaaatttggctggtgaaactgggtct
gaggtcattccccacacttggctgttggaatcaattgctgcatgcaaaaaggcttggaat
caattgtaa
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integrated database retrieval system
