Rhododendron vialii: 131321093
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Entry
131321093 CDS
T09330
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''alpha-like isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
rvl
Rhododendron vialii
Pathway
rvl03015
mRNA surveillance pathway
rvl04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131321093
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
131321093
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rvl01009
]
131321093
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131321093
03036 Chromosome and associated proteins [BR:
rvl03036
]
131321093
Protein phosphatases and associated proteins [BR:
rvl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
131321093
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
131321093
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
131321093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
P2R3B_EF-hand
Motif
Other DBs
NCBI-GeneID:
131321093
NCBI-ProteinID:
XP_058208088
LinkDB
All DBs
Position
1a:complement(45929347..45935655)
Genome browser
AA seq
539 aa
AA seq
DB search
MDIVGDVTSLDPELLLQLQEQEVSSVVRLKNSPRIAEDLFAQWLSLPQTGRLVKSLLNDA
KSGIPTNNAMGTSSISNVVGGSNSLASKFHVGSSAPPLSPGIDSSSPRSLKQRTNPFSLG
STLKCEPVRENIPQFYFQNGCPAPKELKEQCLSRINQLFNGSDGLQVHEFKQVTKELCKL
PSFFSSALFRKIDTACTGMVTRDAFVKYWVDGNMLTKDIATQIFKILKQPNLKYLTKADF
KPILRELLATHPGLEFLQSTPDFQERYAETVVCRIFFYVNRSGNGQLTLRELKRGNLIEA
MQHADEEKDINKILRYFSYEHFYVIYCIFWELDTDHDFLIDKENLIRYGNHALTYRIIGR
IFSQVPRNFSSNIEGKMAYEDFVYFVLAEEDKSSEPSLEYWFKCIDLDGNGVITVNEMQY
IYEEQFHRIECMAQEPILFEDILCQIVDMIKPEREDYITLRDFKGCKLSGHIFNILFNLN
KFMAFETRDPFLIRQEREDPSLTDWDRFAHREYIRLSIEEEGDKNEGIKVWKRSVEAPF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgtgggggatgtgacgtcactggaccctgaactgttgctgcaactacaagaa
caagaggtctcctctgtagtaaggctaaagaacagccctcggattgccgaagacctgttt
gctcagtggttatcacttccacaaactggccgactggtgaaatcgttacttaatgatgca
aaatcaggtatacctactaataatgccatggggacctcttcgatttcaaatgttgttggt
ggtagcaattcattggcttctaagtttcatgtgggtagtagtgcacctccactttcacct
ggaattgattctagttctccgcgttctttgaagcagaggactaaccctttttcactgggt
tctacactaaaatgtgaaccagttagagaaaacatacctcagttctattttcaaaatggt
tgtccagccccaaaggaactaaaagaacaatgtctttctagaatcaatcagcttttcaat
ggatcggatggattgcaagtacatgaatttaaacaagtcacaaaggaattatgcaagttg
ccatcattcttttcctctgcgcttttcagaaagatagacactgcttgcacaggaatggtt
actagagatgcatttgtcaaatattgggttgatggcaacatgctgacaaaggatatagcg
acccagatattcaaaattcttaagcaacctaaccttaaatatcttaccaaggctgacttc
aaacctattcttcgggaacttttggctacccatccagggttggaattcttacaaagcaca
cccgactttcaagaaagatatgctgaaactgttgtatgcagaatatttttctacgtcaat
agatctggaaatggccaactgaccctcagggagctgaaacgtggaaaccttattgaagca
atgcagcatgcagatgaagaaaaggatattaacaaaattctgaggtacttctcttatgag
cacttttatgttatatactgcatattttgggagctggacacagaccatgatttcttaatt
gacaaggagaaccttatcagatatggtaatcatgctcttacttacaggatcattggtagg
atattttcacaggttccaaggaactttagtagcaatattgaagggaaaatggcttatgaa
gattttgtttatttcgtgcttgcggaggaggataaatcatctgaacctagtcttgagtat
tggttcaaatgcatagatttggatggaaatggggtgataacagtgaatgaaatgcagtat
atttatgaggaacagtttcaccgaatagagtgcatggcccaagagcctatactatttgaa
gacatcttatgtcagattgtggacatgattaaaccagagagggaggattacatcacactc
cgtgacttcaaagggtgcaaactttcaggacacattttcaatatccttttcaatctcaat
aagttcatggctttcgaaactcgtgatccatttctcattcgccaggagcgagaggatccg
tctttgacagattgggatcgctttgcacatagagaatatattaggctctcaatagaagaa
gagggagacaaaaatgaaggtattaaagtctggaaaagatcagttgaggcacccttttga
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