Rhododendron vialii: 131321286
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Entry
131321286 CDS
T09330
Name
(RefSeq) pre-mRNA-splicing factor SLU7
KO
K12819
pre-mRNA-processing factor SLU7
Organism
rvl
Rhododendron vialii
Pathway
rvl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131321286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rvl03041
]
131321286
Spliceosome [BR:
rvl03041
]
Complex C
Other components
Step II factors
131321286
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
131321286
NCBI-ProteinID:
XP_058208268
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Position
1a:complement(46073195..46079423)
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AA seq
536 aa
AA seq
DB search
MATASVAFKSREDHRKQMELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNSERP
SLKHQRKWKSDPNYTKSWYDRGAKIYQADKFRKGACENCGAMTHDLKSCMERPRRVGAKW
TDKNIAPDEKIETFELDYDGKRDRWNGYDAASYAYVIERYEARDESRKKYLKEQQLKKLE
EKNGNESGEDGVSDEDDNEDDLKVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLRI
REDTAKYLLNLDVNSAHYDPKTRSMREDPLPDMDPNEKFYAGDNQNRVSGQALEFKQLNI
HAWEAFDKGHDVHMQAAPSQAELLYKNFKVNKEKLKSEVKETIMEKYGNAATEEQLPREL
LLGQSEREVEYDRAGRIIKGQELALPRSKYEEDVHINNHTSVWGSWWRDHQWGYKCCKQT
IRNSYCTGAAGIEAAEAAADLMRDNLARKEAAEEMPAQTEEKKLATWGTDIPDDLVLDEK
LLAEALKKEDERKKEQKDERKRKYNVKWNDEVTAEDMEAYRMKKIHHDDPMKEFLH
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgcatcagtggcattcaaatctagggaggaccatagaaagcagatggaattg
gaagaagcacgtaaagcaggtcttgctccagccgaggttgatgaagatggaaaagaaatc
aatccccatattccacagtatatgtcatcggcaccttggtatcttaattcagaaagaccg
agtttaaaacatcaaaggaaatggaagtcggatccaaattatacaaaatcatggtatgac
agaggtgcaaaaatttatcaggctgacaagttcaggaagggtgcttgcgaaaactgtgga
gccatgacacacgatttgaagtcatgcatggaaaggccacgtagagtgggagctaaatgg
acggacaaaaatattgcaccggatgagaaaatagagaccttcgagctggattatgatggc
aaacgggaccgttggaatggctatgatgccgctagctatgcctatgttattgagagatac
gaagcaagggatgaatccagaaagaaatacttgaaagagcaacagcttaagaaattagag
gagaaaaacggtaacgaaagtggagaggatggggttagtgacgaggacgacaatgaagat
gatctgaaggtggatgaagccaaggttgatgagagcaaacagatggactttgcgaaggtt
gagaagcgtgtgcgtactactggtggtgggagtacaggaactgtcaggaacctgcgtatc
cgagaggacacagcgaaataccttcttaatcttgacgttaactctgcccactacgatcca
aaaacccgatccatgcgtgaggatcctcttccagatatggatcccaacgagaaattttat
gcaggggataatcaaaatagagtaagcggtcaagctttggaattcaagcagctcaacatt
catgcttgggaggcatttgacaaggggcatgatgttcacatgcaagcagctccgtctcaa
gcagagttgctttataagaattttaaggtcaataaggaaaagctgaaatcagaagtgaag
gagaccattatggagaagtatggcaatgctgctacagaagaacaacttccaagggagctt
ttactgggacaaagtgagagagaggtcgagtatgatcgtgctggcaggattataaagggc
caggagctagcccttcctaggagtaagtatgaggaagatgttcatatcaacaaccacact
agtgtttggggttcgtggtggagggatcatcaatggggttacaagtgttgcaaacagact
atccgaaacagctattgtacgggtgctgctggtattgaagcagctgaagctgcagcagat
ctaatgagggataatcttgctcgtaaagaagctgcagaagagatgcctgcacagacagag
gagaagaaacttgctacttggggaactgatataccggatgatttggttcttgatgagaag
ttactagctgaagcactaaagaaggaggatgaaagaaagaaagaacagaaagatgaaaga
aagcgcaagtacaatgtcaaatggaatgatgaggttactgctgaggatatggaggcatac
aggatgaagaaaatccatcacgatgatccaatgaaggaattcctgcactaa
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