Rhododendron vialii: 131321622
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Entry
131321622 CDS
T09330
Name
(RefSeq) E3 ubiquitin-protein ligase RHF1A-like
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rvl04121
]
131321622
Enzymes [BR:
rvl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131321622
Ubiquitin system [BR:
rvl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131321622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_UBOX
zf-RING_11
zf-RING_5
zf-C3HC4
zf-C3HC4_2
zf-ANAPC11
zf-RING_Vps41
zf-C3HC4_4
zf-Nse
zf_RING_Vps8
zf-C3HC4_3
zf_RING_Vps8_fungal
PHD_NSD
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
131321622
NCBI-ProteinID:
XP_058208490
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All DBs
Position
4a:complement(39211161..39217050)
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AA seq
389 aa
AA seq
DB search
MEDFVSPLQTPPIVSSASSSGAVIADDDLDDACSICLEPYNSDDPPTVTNCKHEYHLQCI
LEWSQRSKECPICWQLLVLKDPASQELLDAVEVERKLRSSRHARHTYEDNIINHDNSYAE
DSDFDEHIMRHFAAAARRARYVNRRGRERSSSTGPSEFLISVQTEGLPQDVQHMHTSPEE
HQSSRFEFSVGDSPNSGMLTGINAQRPPSMVQGNMNMNLNSVDDRDGLIKPSQMLPESPQ
RSSSTEFRAFSESIKSKFSSASARYKESFSKSTQGLKEKLLARNISVTELGKGVQREMNA
GITGVARMFERLDVAAKRTGVSVPLSNSPGWTSNFSDKGKDMRESDITQSPNVSTGETAN
NRSSATPPYAHSDSATPGQLEVSVAQSGN
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggaggatttcgtttcgccgctccaaacccctccgatcgtctcctccgcgtcgtcctcc
ggagccgtgattgccgatgatgatttagacgatgcatgcagtatctgtctcgagccttac
aactccgacgatccccccactgtcactaattgcaaacacgagtatcatcttcagtgtatt
cttgaatggtcacagagaagcaaagaatgccctatatgctggcagcttcttgtcctgaag
gacccagccagccaagagcttttagatgcagtggaggttgagaggaaattgaggtcaagt
cgccatgctcggcatacctatgaggacaacataattaaccatgataattcttatgcagag
gattcggattttgatgagcatattatgcggcattttgctgctgcagcacgcagagctcgt
tatgttaacagaagggggagggagagatcttccagtactggtccttcagagtttttgatc
tctgttcaaaccgaaggtctacctcaagatgtgcagcatatgcacacatcaccggaagag
caccaaagttccaggtttgagttttctgtgggtgattcgccaaattctggcatgctaact
ggcattaatgctcaaaggccaccatctatggttcaaggcaatatgaatatgaacctcaac
tctgttgatgacagggatggcttgattaagcccagccagatgttgcccgaaagtccacaa
agatcgagctcaactgaatttcgtgctttttcggagtctatcaagtctaaattttcttct
gcatctgcccgatataaagaatcattctcaaaaagtactcaaggactgaaggagaagcta
cttgcacgcaatatctcagttacagaattggggaaaggagttcagcgtgagatgaatgca
ggaattactggtgttgcacgaatgttcgagcggcttgatgttgctgctaaaaggactgga
gtgtctgtcccgttatccaattcccctggatggacctcaaacttctctgacaagggaaaa
gacatgcgagagagtgatattactcaatctcctaatgtaagtacaggggaaactgcaaat
aatcggagttcagctacacctccttatgctcacagtgacagtgcaaccccaggccagctt
gaagtttccgttgctcagagtggaaattga
DBGET
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