Rhododendron vialii: 131321710
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Entry
131321710 CDS
T09330
Name
(RefSeq) DNA polymerase I A, chloroplastic/mitochondrial
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rvl
Rhododendron vialii
Pathway
rvl03030
DNA replication
rvl03410
Base excision repair
rvl03420
Nucleotide excision repair
rvl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
131321710
03410 Base excision repair
131321710
03420 Nucleotide excision repair
131321710
03440 Homologous recombination
131321710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rvl03032
]
131321710
03400 DNA repair and recombination proteins [BR:
rvl03400
]
131321710
Enzymes [BR:
rvl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
131321710
DNA replication proteins [BR:
rvl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
131321710
DNA repair and recombination proteins [BR:
rvl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
131321710
NER (nucleotide excision repair)
GGR (global genome repair) factors
131321710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
131321710
NCBI-ProteinID:
XP_058208587
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All DBs
Position
4a:2178513..2188857
Genome browser
AA seq
1178 aa
AA seq
DB search
MAMGMSTQSSSPFKKPSFPALFLFSSSPLPSSWRCFWASSRKAVRRHGDCALHNVAGPLP
NMVMFSSSFQFKRGASYNTMSSEENVKQDDMELYLQSIGWTLEVPEQVSNPSISHARMLP
DYPPQSSTIENSSGGSSSLQRLGEENEQGDCFSASASSGATAIQLLEKTQLFKDKKGAGW
GNHKNGNRNIGILSEVTTGTSVDSGREGFEDGSTCYASNFYEDLCPLDIEIASRETTLQH
SRNSNQSDAGNGALRGSTGEKHLRDASDQGISTPRHKPTQQPKNSKNGEGDDSIINGHAS
HMPAAEQKCSRRNYITDNKAGDPPLRFSREHDLSSTLTSPSYVQLEWPPSGEFLEEWDFI
KSKHIDGSVSVSEATFMPTTGQEPDPYKRLLQIYDKVLIVDSIPMAREIVGMLTNQYRHL
VHACDTEVSNIDVKQETPVDHGEITCFSIYCGPKANFGNGKSCIWVDVLDGGGKSLLVEF
APFFEDPSIKKVWHNYSFDRHVIENYGIKVSGFHADTMHLARLWDSSRQTKGGYSLEALT
GDPAVCGDKNMVGKVSMKNIFGRRKLKKDGSEGKIITIPPVEELQREERKPWICYSALDA
MSTLKLYENLKSKLSGREWKLDGCTKGRMIDFYEKYWRPFGEILVEMEAEGMLVDRVYLA
EIEKVAQAEQQVAANRFRRWASKYCPDAKYMNVGSDAQLRQLFFGGAQNSKDPNESLPDE
RDFKIPNVEKVIEEGKKTATKFRTIRLHRLLRDTRIDPEIYTASGWPSASGDALKTLAGK
VSAEFSFTDESDSLQKDANVGNLPETKVPGVKVGAVSECTESAYGTAYAPFGRGEKGKEA
CHAIAALCEMCSIDSLLSNFILPLQGSHIAGKNGRIHCSLNINTETGRLSARRPNLQNQP
ALEKDRYKIRQAFIAAPGNSLIVADYGQLELRILAHLANCKSMLDAFEAGGDFHSRTAMN
MYPHIRKAVDQKHVLLEWHPQPGEEKPPVPLLKDAFASERRKAKMLNFSIAYGKTPVGLA
RDWKVSVKEAKETVDLWYNERHEVRKWQEERKKEAQKDSCVHTLLGRVRHFPSMKNVTPY
QKGHIERAAINTPVQGSAADVAMCAMIEISKNARLKELGWRLLLQVHDEVILEGPTESGE
EAKAIVVDCMSKPFDGKNILQVDLSVDAKCAQNWYSAK
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgggcatgtctactcaaagcagcagccccttcaaaaaaccctctttccctgct
cttttcttgttttcaagctcgcctctcccctcttcttggcgctgcttttgggcttcctcc
agaaaagccgtacgcaggcacggggattgtgcactccacaatgttgccggtccattacct
aatatggttatgttcagtagttcttttcagtttaaacgaggtgcaagctacaataccatg
tcatctgaagagaatgttaaacaagatgacatggagttgtatcttcaatctattggatgg
acgcttgaggttcctgagcaggtgagcaacccttccatctcacatgctcggatgcttcct
gattacccacctcagtctagcactatagaaaactcctctgggggttctagtagcctgcaa
aggcttggggaagagaatgaacaaggagattgcttcagcgcaagtgcttcttctggtgct
actgcaatacaactgcttgagaagacacaactctttaaggacaagaagggggcaggttgg
ggtaatcacaagaacggaaatagaaatattggaattttatcggaagtaactactggaacg
agtgtggacagtgggagagagggttttgaagatggaagtacttgttatgcttcgaatttt
tatgaagatttgtgtcctttggatattgaaatagccagcagagaaacaactttacaacat
tcaaggaacagcaaccaatctgatgctggaaatggagctttaagaggctcaacgggagaa
aagcacttgagagatgcctcagatcaaggaatttctacacctcggcataaacccactcaa
caaccaaaaaattcaaagaatggtgaaggggatgatagcattattaatggtcatgcttca
cacatgccagctgctgaacaaaaatgcagtaggagaaactacattactgataataaggct
ggtgatcctcctcttcgtttctctagggaacatgatttatcttcaacgctgacatcccca
tcatatgtccagctcgagtggccaccatcaggggagttcttagaggaatgggatttcata
aaatccaagcatattgatggtagtgtctctgtaagcgaagccacttttatgccaacaact
ggtcaggaacccgatccttacaagaggcttctccagatttatgacaaggttcttatagtt
gatagtatccccatggcaagggaaattgtgggaatgcttacaaatcagtacaggcatctt
gtccatgcatgtgatacagaggtgtcaaatattgatgtcaagcaggaaacaccagttgac
cacggagaaataacctgctttagtatttactgtggacccaaagcaaattttggcaacgga
aaatcttgcatttgggtagatgttcttgatggcggtggcaagagtcttttagttgaattt
gctcctttctttgaagatccatctataaaaaaggtttggcacaattatagctttgatagg
catgttatagagaactatgggattaaagtttctggctttcatgctgacaccatgcatctg
gctcgactatgggattcttcaagacaaacgaagggtggttattctctagaagcactcaca
ggtgacccggcggtgtgtggtgataaaaatatggttggtaaagtatctatgaaaaacatc
tttggcaggagaaagttgaaaaaagatggatctgagggaaaaattatcaccattcctccc
gttgaagagctacaaagagaagagaggaaaccatggatttgctattctgccttagatgca
atgagcacactaaagctctatgagaacttgaaaagcaaactatcagggagggaatggaaa
cttgatggatgcacaaaaggacgtatgatcgacttttatgagaaatattggcgcccattt
ggtgagattcttgtcgaaatggaagctgaagggatgctggttgatcgagtatatcttgct
gagatcgagaaagtggctcaagcagagcagcaagttgctgctaacagatttcgccgttgg
gcatctaagtattgcccagatgctaaatacatgaatgtaggaagtgatgcacagttgcgc
cagctcttttttggtggagctcaaaacagcaaggatccaaacgagagccttccagatgag
agggattttaaaattcccaatgttgagaaagtgatcgaagaaggcaagaaaactgccaca
aaattccgcacgattagactgcatagactacttcgtgatactcggatagaccctgagatc
tatactgcatctggttggccctctgctagtggagacgctttgaagacccttgcgggcaag
gtttctgcagaatttagttttacagatgaatctgattcattgcagaaggatgccaatgtt
ggaaatttgcctgaaaccaaggtcccaggggtaaaggtcggagctgttagtgagtgcacc
gaatctgcctatggtacggcttatgctccgttcggaaggggagaaaaggggaaggaggca
tgccatgccattgctgctttatgtgaaatgtgctctatagactctttgttatccaacttc
atcctccccttgcagggcagtcatatagcaggcaagaatgggcgtatccattgttctcta
aacatcaacacagaaactgggcgcttatcagctaggagaccaaatttgcagaatcagcct
gctttggagaaagatcgctataagatccgccaggcatttattgctgcaccaggaaactcc
cttattgttgctgattacgggcagctggaacttaggattcttgcacatcttgccaactgt
aagagcatgttggacgcctttgaggcgggtggtgacttccattcaaggacggcgatgaac
atgtatccacacattcgtaaagctgttgaccagaagcatgtgcttcttgaatggcatcct
caacctggtgaagaaaagccgccggtccctttactgaaggatgcttttgcttctgaaaga
aggaaagcaaagatgctcaacttttccattgcttatgggaaaactccagtgggtcttgcc
cgtgattggaaggtttctgtaaaggaagcaaaagaaactgtcgatctctggtacaatgag
agacacgaagtgcggaaatggcaggaagaacgtaagaaggaagctcaaaaagatagttgt
gttcacacattgctaggaagggtccgccatttcccttcgatgaagaatgtcacaccctat
caaaaaggtcatattgaacgagctgccatcaacaccccagtccagggtagcgctgctgat
gttgccatgtgtgccatgatagaaatatcaaagaatgctcgtttgaaagagcttggatgg
aggctgctattgcaggttcatgatgaagtaatccttgaaggaccaacagagtctggcgag
gaggccaaggccatcgttgttgactgcatgtccaaaccctttgacggcaagaatattctg
caggttgatctctctgtcgatgccaaatgtgctcaaaactggtattcggcaaagtaa
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integrated database retrieval system
