Rhododendron vialii: 131321830
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Entry
131321830 CDS
T09330
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
rvl
Rhododendron vialii
Pathway
rvl03013
Nucleocytoplasmic transport
rvl03015
mRNA surveillance pathway
rvl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131321830
09122 Translation
03013 Nucleocytoplasmic transport
131321830
03015 mRNA surveillance pathway
131321830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131321830
03041 Spliceosome [BR:
rvl03041
]
131321830
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
131321830
Spliceosome [BR:
rvl03041
]
Common components
Common spliceosomal components
Cap binding complex
131321830
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
THB
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
131321830
NCBI-ProteinID:
XP_058208766
LinkDB
All DBs
Position
4a:274608..296325
Genome browser
AA seq
862 aa
AA seq
DB search
MSSWKSLVLRIGEKCPEYGGITDSKDHIETCFGVVRRELEHSGMDILTFLLQCAEQLPHK
IPLYATLVGLLNLENEDFARKVVENTYTNLQDALDSGNCNSIRIWMRFLTAMMCSKVVQP
NSLVFAYEALLSSAATTVDEEKGNPAWQACADFYITCVLSCLPWGGAELVEQVPDDIQSV
MSGVQGYFSLRRRVSDSGFSVFKDADDTENALDEKDFLEDLWGWIQDLSNRGWKLDSVPR
PHLSFEAQLVAGKSHDLAQISCPKPPDPPAVLSAVACGKQKHEAELKYPRRIRRLDIFPT
SKMEDIQPIDRFVVEEYLLDVLLYLNGCRKECASYMVGLPVTFRYEYLMAETIFSQLLFL
PHPPFKPMYYTLVIIDLCKSLPGAFPAVVAGAVRALFDKIDDLDMECRTRLILWFSHHLS
NFQFVWPWEEWAFVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPALEELLPPK
GVPNFKYGGEGGRDGTEHALSSELSGMVKGRQTVREIISWMEESVIPAHGFEITLSVIVQ
TLLDIGSKSFTHLITVLERYGQVIARICPDQDKQVMLIDEVSSYWKNSAQLTAITIDRMM
GYRLISNMAIVRWVFSPVNFELFHTSDRLWEILRNAVNKTYNRICDLRKEISTLKKGVVS
AEEAATKAKAELEGAESQLTLMDGEPVLGENPVRLKRLKARAEKTKEEEVSARESLEAKE
ALLARALDENEALFLSLFKNFSTVMTERLDDAFRDGALQQPSQADEMAIDLEDTSAMELD
KENAKPEKSHSNGGSAGNGYKVGEKEQWCLSTLGCVKALTRQYASEIWLYMEKLDAEALS
GDAHPLFRKAVYSGLRRPLNGS
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttggaagagtttagttcttcgaatcggagagaaatgccctgagtatggcgga
attaccgattccaaagatcacattgagacatgtttcggagtggttcggcgagagttggag
cactcgggaatggatattttgactttcctgcttcagtgtgctgaacaactgccgcacaag
attcctttgtatgcaacgctggttggtttgttaaatttagagaatgaggacttcgccaga
aaagtagtggagaatacttacactaatttgcaggatgctctggattctggcaattgcaac
agcattcgtatatggatgcggtttctcaccgctatgatgtgcagcaaagtcgtccaacca
aattctctagtgtttgcctatgaggcacttttatcatctgcagcaacaacagtggacgag
gagaaaggaaatcctgcttggcaagcatgcgctgacttctacataacttgtgttctatcc
tgtctcccttggggaggagctgaacttgttgagcaagttcctgatgacattcagagtgtt
atgtctggcgtacaaggttatttcagccttagaagacgtgtttctgatagtggtttctct
gttttcaaggacgctgatgacactgagaacgcgcttgatgaaaaggatttcttggaagat
ttatggggttggatccaggatctatccaacagagggtggaaacttgacagtgttcccagg
cctcacctttcatttgaagctcagctggtagccggaaagtctcatgatttggcgcagatc
agctgtcctaagccacccgatccacctgcagtactctctgctgtagcttgtggcaagcag
aagcatgaggctgaattgaaatatcctcgaaggatacgcaggcttgacatctttcctaca
agtaaaatggaggatatacaacctatagatcgctttgttgttgaagagtatttactggat
gtgcttttgtacctgaatggctgtcgaaaggaatgcgcttcctacatggttggtctacct
gtgacttttcgatatgaatatctcatggcagaaaccatattctctcagcttctctttttg
ccccatcccccattcaagcctatgtactacactttggttattattgacctttgtaagtct
cttccaggggcctttccggctgttgtagctggtgccgttcgtgctctgtttgataaaata
gatgatttagacatggaatgccgcacacgccttatcctttggttctctcaccatctatct
aactttcaatttgtttggccatgggaggaatgggcttttgtcttagaccttccaaaatgg
gccccgcagcgtgtttttgttcaagaggttttggagagagaagtccgtttgtcatattgg
gacaaagttaagcagagcattgagaatgcccctgctttggaggagttgcttcctccgaag
ggtgtaccaaacttcaaatatggcggtgaaggtggtagagatggaactgaacatgcactt
tcttcagaactcagtggcatggtgaaaggaaggcaaactgtccgtgaaattatttcgtgg
atggaagaaagtgtaattcctgctcatggttttgaaattacactcagtgtgattgttcag
acccttcttgacataggttcaaaaagctttactcatttgatcactgtcttggagaggtat
ggtcaagtgattgcgaggatatgcccagatcaagataagcaagtaatgctgatagatgaa
gtaagctcttactggaagaacagtgctcaattgacagctataaccattgatagaatgatg
ggttatcgtcttatatctaatatggccattgtgagatgggtcttctctcccgtgaacttt
gagctgtttcatacctctgaccgtctgtgggagattcttaggaatgctgttaataagacc
tataatcgtatttgtgatctaagaaaagagatctctaccctcaagaaaggtgttgtgtca
gctgaggaagccgcaactaaagctaaagcagagttggagggcgctgagtcacagctgact
ctaatggatggtgaacctgttctgggggaaaaccctgtgagattgaagcgcttgaaagct
agagctgaaaaaacaaaagaggaggaggtatcggctcgtgaatctttagaggcgaaggag
gctctccttgctcgagcccttgatgaaaatgaggcactgttcctttccttgtttaagaac
ttctcaactgtcatgacggaacgtctagatgatgcctttagagatggagcattgcagcag
cctagtcaagcagatgaaatggcgattgaccttgaagacacatctgccatggagctggac
aaagaaaatgcaaaacctgagaaaagccattcaaatgggggaagtgctggcaatggctat
aaggttggtgaaaaagagcaatggtgtttatcaactcttggttgcgtgaaggcccttaca
aggcaatatgcttccgagatatggctgtacatggagaagttagatgcagaggcattgtca
ggagatgcacaccctctctttcgaaaggccgtatattctgggttgcgtcgacctttgaat
gggtcgtga
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