Rhododendron vialii: 131321914
Help
Entry
131321914 CDS
T09330
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
rvl
Rhododendron vialii
Pathway
rvl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131321914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rvl04121
]
131321914
Enzymes [BR:
rvl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
131321914
Ubiquitin system [BR:
rvl04121
]
Ubiquitin ligases (E3)
HECT type E3
131321914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Arm
ARM_ARMC5
HEAT_2
PDS5
Motif
Other DBs
NCBI-GeneID:
131321914
NCBI-ProteinID:
XP_058208913
LinkDB
All DBs
Position
4a:complement(31321711..31335385)
Genome browser
AA seq
1569 aa
AA seq
DB search
METRGQKRAEKLDELPADKRACSSLELRPSSSNSPVQTPINPPNSTLEAHDGDMDTSSSA
SISTRSEGEGEKDSAYESSDSDGEHRHNSLRDYQRMRSDDHGKFKRVLSSLGQEGDDSVA
LAALTELCELLSFCPDSSVSGLMADTLSPILVKLARHESNPNIMLLAIRAITYLCDVHSR
SSGFLVRHDAIPALCQRLTAIDYGDVAEQCLQALEKISLEQPLACLQSGAIMSVLTHIEF
LTTSVQRVALSTVVNICKKLPSECPSPFMEAVPILCTLLQYEDRQLVENAATCLIKIAER
VCHSSDMLDELCKHGLIHQAMHLVDVNCRTTLCQPVYSGLLGLLVKLASGSLVAYRTLFE
LNISSILKDILSAYSLSHGVPSPSMVDGHSYQVHEVLKLLNELLPAIARDLNVSINSDKE
DFLVNEPNFLQKFGMDLVPILIEVVNSGANIYVCYGSLSVINKFVYFSKSEMLLELLKDT
NISSFLAGVFTRKDQHVLMLALQIADAILQKLSDSFLNSFIKEGVFFAIDALLTPDKCSQ
LMFPTLSGIQLSNDPSKKSAARDVPRCLCYAFGTGQPLIASETRTCNLEKDYVYNLAKQI
KTNYFASELLNPERGVTDVLQKLRILAAALTDLVNLSMIKDGPVRHEEEFYAILHQIMCQ
VNGGDPISTFEFVESGIVKALVYYLCNAQYWKGNTELTVGFDHTNNVEKRFEVFGRLFLS
SLEAPLQDFYLSVLTRKLQTALSSVENFPVIVSQSYKQRNSYATVPFGRSMPYPCLRVQF
MRGEGETSLCDYSEDVLTVDPFSSLDDIESYLWPKVSKSSTEQVKSAATPALGRLEGLPS
RMPSDMSSPEGKSQDFMESENVSSDMQEIQVDKADIPHSAPEEGDNLRQTTIDTTGSSEA
PTDPVQDHEEIRVDTSNEDTIMSTDFSGSSSNEDASLKLLFYLEGQPLDRSSSLYQGILQ
QQIKAENDIVNGGKIWSKVYRVTYRRAVNPRQSCPHDSSMSNRAGTYWQFTPFFFDMFGK
NLGSDLEKSSAVCDVLFVLKSLECVNRFMFHLMSHGRMYAFAKGTIDNLDNLKVMATSVV
QQKEFVSCKLTEKLEQQMRDPLAVSVGGMPLWCSQLMGSYPFLFSFEVRCKYFRLAAFGK
PQAQSHQTTHNDSGGMNGRRQNASGLLHRKKFLVCRNRILASAAEMMDLHARQKAALEVE
YGEEVGTGLGPTLEFYTLVSHEFQKSGLGMWREDHMLLPRERMEDEDSTVLMSPCGLFPR
PWSSTMSIASGIEFSEVIKKFVLLGQVMAKALQDGRVIDIPFSKAFYKLILGQDLTVYDI
FSFDPELGMALLEFQAVFERKKYFESVYGETSSLKRDACFRNTTIEDLCLDLTLPGYPDY
ILTSGPDPQLVNMTNLEQYVSLVVDATVNTGIHRQVEAFKSGFNQVFPIKHLQVFTEEDL
ERLLCGESEFWTQSNELLDHIKFDHGYTASSTPVVDLLEIIREFDRDQQRAFLQFVTGAP
RLPPGGLASLNPKLTIVRKQHCSRWADAELPSVMTCANYLKLPPYSSKERMKEKLLYAIT
EGQGSFHLS
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atggagactcgaggccaaaaacgggccgaaaagcttgatgagttgcctgctgacaagcga
gcatgtagttcattggagctaagaccaagttcatccaactcacctgttcaaactccaatt
aaccccccaaattcaactcttgaagcccacgatggcgacatggacacatcgtcatcggct
tcaatatcgacccgatcggaaggggaaggtgaaaaggactctgcatatgagtcatctgat
tcagatggagaacataggcacaacagccttcgtgattatcagagaatgcgatcggacgat
cacgggaagtttaagagggtcttgtcaagtttaggccaagagggtgatgattctgtggcg
ttggctgctcttactgagctatgtgaattgctgtccttttgccctgacagctctgtatcg
ggcttgatggcagacacattatctccaattcttgtaaagttggcaaggcacgagagcaat
cccaatataatgcttttagctatcagagctataacttatttatgtgatgtgcattctcga
tcatctggttttcttgtacggcatgatgcaattcctgctctatgtcaaagattaacggcc
attgactacggtgatgtagccgaacaatgcttgcaagccttagagaaaatctcattagag
caaccacttgcatgcttacaatctggagcaattatgtctgttttaactcacattgaattt
ctcacaacaagtgtgcagagggttgcactttcaactgtggtcaacatatgtaagaaactt
ccatctgaatgtccttcacctttcatggaggcagttccaatattgtgtactctacttcag
tacgaggatcgtcagcttgttgaaaatgcagccacttgcttgataaaaatagcagaacga
gtatgccactcttctgatatgctggacgaactttgtaaacatgggctgattcatcaagct
atgcatcttgtcgacgtgaattgtcgaaccactttatgccaacccgtttacagtggtttg
cttgggctgcttgtcaaacttgcttctggctcacttgttgcttacaggactcttttcgag
cttaatatcagcagtatattgaaggacatcttgtctgcttatagtctttcacatggagtg
ccttctcctagtatggttgatggacattcctaccaggtgcatgaagttttgaaactactt
aatgagcttctccctgctatagctagagatctcaatgtttcaataaactcggacaaggaa
gattttctggtaaatgaacccaattttctgcaaaagtttgggatggatttggttcccata
ttgatcgaggtggttaattccggtgcaaatatatatgtttgttatggcagtctatcagtt
atcaataaatttgtttacttcagcaaatctgagatgcttcttgaattgctcaaggacacc
aacatttcaagtttcttagctggggtattcactcggaaggatcaacatgtcctgatgtta
gccctgcagattgctgatgccatcctgcaaaagctttccgatagttttttgaattctttc
ataaaggaaggcgtcttttttgccattgatgcacttctaacaccagataagtgttcacag
ttgatgtttccaacgctcagcggcatccagttatcaaacgatccaagtaaaaaatctgct
gcaagggatgtccccagatgcttgtgttatgcatttggaactggtcagcctcttatcgct
tcagagactaggacgtgcaatcttgaaaaagattatgtttacaatcttgcaaagcagata
aagacgaattactttgcttcggaattactaaaccctgagagaggagttactgatgttctt
cagaaactcagaattttagctgcagcactaactgatctagtaaacctgtccatgattaaa
gatggtcctgtgcggcatgaggaggagttttatgccattttgcatcaaattatgtgtcag
gttaatggaggagatcccatttcaacttttgaatttgttgaaagtggaattgtgaaagca
ctagtttattacttgtgcaatgcacaatactggaaaggaaacactgaacttactgttggg
tttgatcacacaaataatgtagaaaagagatttgaggtgtttggaagactattcttatct
tctttggaagcacctttacaggacttctatctatcagtattaacccgaaaactgcaaact
gcactgtcttctgtggagaatttcccggttattgtgagccaatcatacaagcaaaggaac
tcttatgctactgttccatttgggcgttccatgccatatccttgtcttagagtgcagttc
atgaggggagaaggggaaacctctctatgtgattactctgaagatgttctgactgttgat
cctttttcttctttggatgatattgaaagctatttgtggcctaaagttagcaaaagcagc
acagagcaagtaaaatcggcagctactccagctctgggtagattggaaggtttgccttct
cgaatgccatcagatatgagctctcctgaaggcaaaagtcaggactttatggaatctgag
aacgtatcttctgatatgcaggagattcaggtggacaaggctgacataccacattctgca
ccagaagaaggggataatttaagacaaaccaccattgataccacaggctcgagcgaagct
cctacggaccctgtgcaggaccatgaggagatcagagtggatacttcgaacgaggataca
atcatgagcacagatttttctggatcctcgagcaatgaagacgcctcactgaaattgtta
ttttacctagaagggcaaccactggaccgatcatcgtcactgtatcaagggattctccaa
caacagattaaagctgaaaatgatattgttaatggtgggaaaatatggagtaaagtatac
agagtaacatatagaagagctgtgaacccaagacaaagctgtcctcatgattcttcgatg
tcaaacagagctgggacatattggcagtttactccatttttctttgacatgtttggtaaa
aacttgggttctgacttggaaaagtcaagtgctgtttgcgatgtgttgtttgtactcaaa
agtttggaatgcgttaataggttcatgtttcatctgatgtctcatggaaggatgtatgcc
tttgcaaaggggacaattgataacttggacaacttaaaggtaatggccaccagtgttgtc
caacagaaagagtttgtgagctgtaaattgacagaaaaactagaacagcagatgcgggac
cctttggctgtttcagttggtggtatgcctttatggtgtagccaattgatgggttcatac
ccatttttattcagtttcgaggtaagatgcaagtacttcagattggcagcatttggtaag
ccgcaagctcaatctcatcaaacaactcacaatgattcaggaggcatgaatgggaggagg
cagaatgcttctggtttattgcaccgtaagaaatttttagtgtgccgtaatcggattctg
gcgtctgctgccgaaatgatggacctacatgcccgtcaaaaagctgcacttgaagtggag
tatggtgaagaagttggtactggtcttggtccgacattggaattctataccctggttagt
catgagtttcagaaatctggcctgggcatgtggagagaagaccatatgttattacctagg
gaaagaatggaggatgaagattctactgtgttgatgtctccttgtgggcttttccctcgt
ccttggtcatcgaccatgagtatagcaagtggcatagaattctcggaagttataaagaag
tttgtccttctgggacaggtcatggcaaaggctcttcaagatggaagggttatagatatc
cccttctccaaagctttttataaacttatccttgggcaggatctcactgtgtatgacatc
ttctcatttgatcctgagctcggtatggctctgctagagttccaggctgtttttgaaagg
aaaaaatattttgaatctgtttatggggaaacctcatctttgaaacgtgacgcatgcttc
cggaatacgacaattgaggacctttgtcttgatttaactcttcctggatatcctgattac
attcttacttctggacctgatcctcaactggtaaatatgacaaacttggagcaatatgtt
tcactagttgtggatgctactgtaaatactggaattcatagacaagtggaagctttcaaa
tccgggtttaaccaggttttccctattaaacatcttcaggttttcaccgaggaggactta
gagcgtctattatgtggagagagtgaattctggacgcagtctaatgagcttttggatcac
atcaagtttgatcatgggtacactgcaagcagtacaccggttgtggatctattggaaatc
attcgggagtttgatcgagaccaacaacgtgcattcctgcagtttgtaactggcgcacct
cggcttccacccggtggtttggcatctttaaatccgaaactcacgattgttcgcaagcag
cattgtagtagatgggctgatgctgagctgccgagtgtgatgacttgtgccaattatctg
aagctcccgccgtactcttcaaaagagaggatgaaagagaagcttttgtacgccatcaca
gagggacaaggatcgttccacctctcttag
DBGET
integrated database retrieval system
