Rhododendron vialii: 131322270
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Entry
131322270 CDS
T09330
Name
(RefSeq) ABC transporter F family member 1 isoform X1
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rvl03009
]
131322270
Ribosome biogenesis [BR:
rvl03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
131322270
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_28
MMR_HSR1
AAA_15
AAA_22
RsgA_GTPase
AAA_23
AAA_24
Ig_F54D1_6_2
Motif
Other DBs
NCBI-GeneID:
131322270
NCBI-ProteinID:
XP_058209513
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Position
1a:40132035..40137952
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AA seq
596 aa
AA seq
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MVSDASKKKAAQKKAAAAAKRGGKAAAAAASSKAADSQAVDSLANGVDKLQISDRTCTGV
LCSHPLSRDIRIESLSLTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCREL
PIPEHMDTYHLSKEIEASDMSSLEAVISCDEERLRLEKEAEALAGQEDGGGETLERIYER
LEALDASTAEKRAAEILYGLGFNKKMQEKKTRDFSGGWRMRIALARALFINPTILLLDEP
TNHLDLEACVWLEETLKKFERILVVVSHSQDFLNGVCTNIIHMQSKKLKLYTGNYDQYVQ
TRSELEENQMKQYRWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKV
ARDKILVFRFTDVGKLPPPVLQFVEVTFGYTPDNLLYKNLDFGVDLDSRVALVGPNGAGK
STLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLAEKLDLELSALQFMMKEYPGNEEEKMR
AAIGKFGLTGKAQVMPMKNLSDGQRSRVIFAWLAWRQPHMLLLDEPTNHLDIETIDSLAE
ALNEWDGGMVLVSHDFRLINQVAQEIWVCENQTVTRWEGDIMDFKEHLRSRAGLSD
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcggacgcgagcaagaagaaggcggcgcagaagaaggcagcggcggcggccaag
agaggagggaaggcggctgcagcggcggcatcgtcgaaggcggctgattcgcaagccgtt
gatagcttggcgaacggagtggacaagcttcagatttcggatcggacttgtactggcgtg
ctctgttcgcatcctctctctagggatattcgtatagagtctctatcgctgacttttcat
ggacatgatctgatcgttgattctgaactggaactcaattatggcagacgctatggtttg
cttggattgaacgggtgtggaaaatctacccttcttactgcaattggttgtcgcgagctt
cctattcctgaacacatggatacttatcacctctctaaggagattgaggcttccgacatg
tcttcacttgaggctgtcataagctgcgatgaggagaggctgaggttggagaaagaagct
gaagcattggcaggacaggaggatggtggtggagaaactcttgaacgcatttatgagcgt
ttggaagcccttgacgcgtcaactgcagagaagcgtgctgctgagatcttgtatggtctt
gggtttaacaagaagatgcaagagaagaaaacacgcgacttttctggtggctggagaatg
agaattgctttagcacgggctctgtttattaacccaaccatcctgttgctcgatgaacct
accaatcatcttgatttggaagcttgtgtgtggttggaggaaactttaaagaaatttgag
cgcattttggtcgtggtttcccactcccaggacttcttgaatggtgtttgtactaacatc
atccacatgcaaagcaagaaactgaagctttacacagggaactatgaccaatacgttcaa
acccgatctgagttggaagaaaaccaaatgaaacaatacagatgggaacaagagcaaatc
gcttcgatgaaagagtacatcgcccggttcggacatggatctgccaaactagcccgtcag
gcccagagtaaggaaaaaaccctggcaaaaatggagcgtggcgggctcacagagaaggtg
gcgagagataagattttggtcttccgatttaccgacgtgggaaagcttccccctcctgtg
cttcaattcgtggaggtaacatttggttatacacccgataacctcctctacaagaatctc
gatttcggggtggatttggactccagagtggctcttgtagggcccaatggagctgggaag
agcacattgctgaagctgatgacgggggatttggtcccacttgatggcatggtccggcgg
cacaaccacctgaggattgcacagttccatcagcatttagctgagaaacttgatctcgaa
ttgtctgctctccagtttatgatgaaagagtatcctggaaacgaggaagagaagatgagg
gcagcgattgggaagtttgggctcacaggtaaagcccaggtgatgcccatgaagaatttg
tctgacgggcagaggagcagggtgattttcgcgtggttggcatggagacagccccacatg
cttttgttggatgaacctacaaaccatttggatatcgagacgatagactcgctggccgag
gctttgaacgaatgggatgggggaatggttcttgttagtcacgatttcaggctcattaac
caggtggcgcaggagatttgggtgtgtgagaatcaaacagtgacccgatgggagggtgat
attatggactttaaggaacacctgagaagtagggctggtctttctgattga
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