KEGG   Rhododendron vialii: 131322451
Entry
131322451         CDS       T09330                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a isoform X1
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
rvl  Rhododendron vialii
Pathway
rvl03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    131322451
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rvl04121]
    131322451
   03036 Chromosome and associated proteins [BR:rvl03036]
    131322451
Enzymes [BR:rvl01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     131322451
Ubiquitin system [BR:rvl04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    131322451
Chromosome and associated proteins [BR:rvl03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     131322451
    Noncanonical PRC1 (PRC1.1)
     131322451
    Noncanonical PRC1 (PRC1.3/1.5)
     131322451
    Noncanonical PRC1 (PRC1.6)
     131322451
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_5 zf-RING_UBOX zf-RING_4 zf-C3HC4_4 RAWUL zf-rbx1 zf-RING_10 zf-RING_11 zf-C3HC4_5 zf-Nse
Other DBs
NCBI-GeneID: 131322451
NCBI-ProteinID: XP_058209755
LinkDB
Position
4a:10634586..10641393
AA seq 471 aa
MPAQKRYSSTSDNNLRDDDDDSSSQLQQHHSRRKQSRRERRAEDEEEEEEEEEEEEEEGR
ENEDVVKEDEDDDSDSDGSRSDDDPANYPEWIIVELPALRTYVQCPICLGIIKKTRTVME
CLHRFCRECIDKSMRLGNNECPACRKHCASRRSLRDDQRFDNLTEVLYEDIEKYEEEVEE
LAFHEEEKSRNKQIQASIAQVLHRQSEALVTKRKTGKERHSSSRLARAYSRRRHSRGTEH
EGSEDDEENNPDENKDSSSTDERGAEIKQRRCRRRAGGQLSQPSPSTANTEGGGIENDLE
ATKESKGTTSGPIWNPEMLAWGGAGARKKSVRNTRIMKLAKYLENLKENDDKVDVHLALV
SLDKQRMPSLQKLYLCCPPQFSVEHLKEYVARETQVRTEDIEILLMKNLSCNGLQSTLDT
SNSMENKDVVQVLEGEDTLAVIRANCASNGNHLILAYRLKEKVHHETTPEC
NT seq 1416 nt   +upstreamnt  +downstreamnt
atgcctgcgcagaagcgttattcgtccacgtcagacaacaacctccgcgacgacgacgac
gactcctcctctcagctgcagcagcatcacagtcgccgcaagcaatcgcggcgggagcga
cgagctgaagacgaagaagaagaagaagaagaagaagaagaagaagaagaagaagggaga
gagaacgaagacgtagtgaaagaagatgaagacgacgactcagattccgacggaagccgt
tccgatgacgaccctgcgaattaccccgaatggataattgtggaactaccggcccttcgt
acgtatgtacaatgtccgatttgtctagggatcatcaagaaaacaagaactgtgatggaa
tgcttgcaccgcttttgcagggagtgcatagacaagtcaatgcgtctggggaacaatgag
tgtcctgcttgccgcaaacattgtgccagtcgtcgttctttgagagatgatcaacgattt
gataacctgactgaggttttatatgaagatattgagaagtatgaggaggaggtagaagaa
ctggcttttcatgaagaggagaagagtcgcaacaagcagattcaagcatcaattgcccaa
gttttacaccggcaatctgaagcactggtgacaaagcgcaaaacaggtaaagaaagacat
tcttcgtcaagattagcacgagcatattctagaagaagacactcccgggggacagagcac
gaaggatcagaagacgatgaggaaaataatccagatgagaacaaggattcatcttcaact
gacgagcgaggagcagaaattaagcagaggaggtgcaggagaagggcaggaggtcagctc
tcccagccttctccatcaactgcaaacacagaaggtggaggcattgaaaatgacttagaa
gcaaccaaagaaagcaaaggtactacttctgggcctatttggaacccagaaatgcttgct
tggggtggagctggtgctcggaaaaagagtgtacggaacacccgcataatgaaactggct
aaatatctcgagaacttaaaggagaatgatgacaaggtagatgtccatcttgcgcttgtt
tctttggacaaacaaagaatgccaagtttgcagaaactgtacctctgctgcccaccacaa
ttttctgttgaacaccttaaagaatatgttgctcgtgagacacaagtacggactgaagat
attgaaatactactgatgaagaacctcagttgcaatggtctgcagtctactcttgacact
tcaaactcaatggaaaacaaggatgtggtgcaagttttggaaggggaagatactttggct
gtgatcagagccaattgtgcttcaaatgggaaccatttgattctggcatataggctgaag
gagaaagtgcatcatgaaactacaccagagtgttga

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