Rhododendron vialii: 131322889
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Entry
131322889 CDS
T09330
Name
(RefSeq) nuclear pore complex protein NUP133
KO
K14300
nuclear pore complex protein Nup133
Organism
rvl
Rhododendron vialii
Pathway
rvl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131322889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131322889
03036 Chromosome and associated proteins [BR:
rvl03036
]
131322889
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131322889
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
131322889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
MfA4_C
Motif
Other DBs
NCBI-GeneID:
131322889
NCBI-ProteinID:
XP_058210429
LinkDB
All DBs
Position
4a:complement(6055571..6066239)
Genome browser
AA seq
1334 aa
AA seq
DB search
MFSPAAKKSNFSARKDRTLLGHHPPLESPTTPLAENRLSLHDNKIPNRPSTGTPAPWASR
LSVLARIPPTKKGEKADNVDPVQPVFVSEFPQVVRNEQANLLQNRVRGDFCTSGGMEKET
SLAWIICGNRLFVWSYVSPAASRKCIVLDLPPNILGDGESGSNSCPADSWMLFIVNWDGP
CRNTDKAIQQCNSAGIVLCNRRTRALVYWPDIYSEDESSPITSLASNDELKMTYSPADGT
TAPNRQRQHSRPVSISSGSSSLNSLIASAIPGGGHLCVALACGSNGELWQFYCSPTGIER
KKIYQDILSSGASDGGQFLGSKGYPRSLIWRFSHSYSEETHRQFFLLTDHEIQCFTVTLS
PSVTVLKLWSHEIVGADGDSGIQKNLAGQKRIWPLDLQVDSQGKVITVLIATFCKDRVSS
SSYIEYSLLTMQYRSGINISPESNVPVHERVLEKKAPLQEVIPKARVEEEDFLFSMKLRV
GGKPSGSSIILSGDGTATVAHYWRNSTRLYQFDLPYDAGKVLDASVFPSSDDDEDGAWAV
LTERAGVWVIPEKAVLLGGVEPPERSLSRKGSTNERSAQEERRNLSVAGNIAPRRASSEA
WDAGERQRAVFPAIARPTAQDEESEALLSHLFHDFLLSGQVDGSLDKLRSAGAFERDKET
NVFARVSKSIVDTLAKHWTTRGAEIVALTFLSTQLMDKQQKHQKFLQFLALSKCHEELCS
GQRPQRESLQIIMEHGEKLAAMIQLRELQNLIGQNRPTGIGSPHSSSEGGISGSLWDLIQ
LVGERARRNTVLLMDRDNAEVFYSKVSDLKELFYCLDKQLGYIISTEMPLVVQIQRACEL
SNACVTLIRAATQYRNEYHMWYPSLEGLTPWYCQPVVRSGLWSIASFMLQLLNGISHLDM
SRKSDFYSNLEVLAEVLLEAYSGAITAKVERKEEQKGLLGEYWNRRDALLDSLYQLVKSS
VETSYQDLGEGNEEQCELILRELSSHLLSIAKQHEGYQTMWNICLDLKDTEVLRNLMHES
MGPKGGFSYFVFKQLYDTKQFSKLIRLGEEFQLELATFLKQHEDLLWLHQAFLHQFFSAS
ETLHKLALSQDDDSIVAAVEGTESHGAGMEPTLAERKRLLHLSKIAVVAGRNADSGEKLK
RIEADLKILKLQEEILNFLTDDEEKQKIGNRLLPPVDLIELCLKSSNQELSLRAFDVFAW
TSSSFLKSNRSLLEECWRNVANQDDWETIYRTSEAEGWSDEETVQHLRETMLFQASSRCY
GPEADTIEGGFDEVLPLRQENSEIPMLKDMGSSVEGILMQHKDFPEAGKLMVMAIMLEFG
RVGAEMGDGPSPMQ
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgttctccccggccgcgaagaagtccaatttcagcgctcgcaaggaccgcaccctcctc
ggtcaccacccgcccctcgagtctccgaccactccgctcgccgagaaccggttatcgctt
cacgacaacaaaatccccaaccgcccctccaccggcactccggcgccatgggcctctcgc
ttatctgtcctcgctagaattccaccaacgaagaaaggtgagaaagcggataatgtagat
ccagttcagcctgtttttgtttcagagttccctcaagtggttcgcaatgaacaagccaat
ctcttgcagaaccgtgttcgaggtgatttttgcacctctggtggaatggagaaggaaact
tcccttgcatggattatttgtgggaacagactctttgtctggagttacgtgtcgcctgct
gcttcaagaaaatgtattgttcttgatcttcctcccaacattttgggagatggagagagt
ggcagcaattcttgtcccgctgacagttggatgctcttcattgtcaactgggatggtcca
tgtagaaatactgacaaagctattcaacagtgcaactctgctggcattgttttgtgtaac
cggcgaactcgagctctggtatactggccggacatatattctgaagatgagagttctcct
ataacaagtttggcatctaatgatgagttaaagatgacttattcacctgctgatgggacg
actgccccaaataggcagcgacagcatagcaggcctgtgagcatttcatctggatcaagt
agtttaaactctttgattgcttctgcgattcctggtggcgggcatctctgtgtggctctg
gcatgtggttctaatggcgagctttggcagttctactgcagccctactggcattgaacga
aaaaagatctatcaggacatattgagttcgggagcaagtgatggaggtcaatttctcggg
agcaaggggtatccgaggtcattgatttggcgtttttcacattcttattcagaagaaact
catcggcagtttttcctgttaactgatcatgagatacagtgtttcactgtcactctttcc
ccctctgtaactgtgttgaagctctggtctcatgaaattgtaggagctgatggtgattct
ggtatccagaaaaatttggctggtcaaaaacggatctggcccttggatctgcaggttgac
agccaagggaaagtgattactgttctaattgccacattttgtaaagaccgggtaagcagt
tcaagctacatagagtactctcttcttacaatgcaatataggtccgggataaatatctcc
ccggaaagtaatgtgccagtacatgagagggttttggagaaaaaagctcctcttcaagag
gtaatccccaaggcaagagtagaagaggaggacttcttattttccatgaaattgcgggta
gggggaaagccttctggatcttctattatactttctggcgatggaactgcgacagttgct
cattattggcgaaattctacaagactgtatcaatttgatctcccttatgatgctgggaaa
gttctagatgcttcagttttcccttcctcagatgatgatgaagatggagcgtgggctgta
ctcactgagagagctggcgtctgggttatccctgagaaggctgttttacttggtggagtt
gaaccaccagagcgaagcttatcgcgtaaagggagcactaatgaaagatctgcacaggag
gagaggaggaacttatcagttgcaggcaatattgctcctagaagggctagttcagaagca
tgggatgctggagagagacaaagggcagttttcccagcgattgcacgtccgacagcgcaa
gatgaagaatcagaagctttattgagtcatcttttccatgattttcttttatccgggcag
gttgatggctcacttgataagcttcgaagtgctggggcatttgaaagggataaagagacg
aatgtttttgctcgtgtaagcaaatcaattgttgacacattagccaagcattggacaacc
agaggtgctgagattgtggctcttacctttctttctactcaactcatggataagcagcag
aagcatcaaaagtttctccagttccttgctttatccaagtgccacgaggagctgtgttca
gggcagagaccgcagagagaatcgctgcagattatcatggaacatggtgaaaagcttgct
gccatgattcaactcagggaactgcaaaacttgattggccagaaccgtccaacaggcatt
ggctcccctcattctagttctgaaggtggaatttctggttctctttgggacctaattcag
ctagtcggtgagcgagcccgtcggaatactgttcttttgatggacagggacaatgctgaa
gtgttctacagtaaggtttcggatctgaaagaattgttttattgcttggacaaacagtta
ggatacatcattagcaccgagatgcctcttgtggttcagattcaaagagcttgtgaactc
tcgaatgcttgcgtgactttaatacgtgcggcgacacaatacagaaatgagtatcacatg
tggtatccctctctcgagggtttaacaccatggtattgtcaacctgttgtgagaagtggc
ctgtggagcattgcctctttcatgcttcagctgttaaatggaatatctcatcttgatatg
tctagaaaatcagatttttattctaatctagaagtactggctgaagtattgcttgaggca
tattctggtgctatcacggcaaaagttgagcgtaaagaagaacaaaaaggtctgttaggt
gagtattggaatagaagggatgctcttctggactctctttatcaacttgtgaaaagttct
gttgaaaccagctatcaggacttgggggaaggaaatgaagagcaatgtgaactgattcta
cgagagctttcatcacatttgttgtctatcgcaaaacagcatgaaggatatcaaactatg
tggaatatatgcttggatcttaaagatacggaagtactcagaaaccttatgcatgagagc
atgggacccaaagggggttttagctatttcgtgttcaaacaattgtatgacactaaacag
ttttcgaagcttattagactgggggaagagttccagttggagctggctacttttctgaag
cagcatgaggatctcctctggcttcatcaagcattccttcatcagtttttctcagcttcc
gaaacccttcacaaattggctctttctcaagatgatgattcaattgtggcagctgtagaa
gggaccgagtctcatggtgcaggaatggaaccaacattagcagaaagaaagcgtcttctc
catctctctaagatagctgtcgttgcaggaaggaatgctgatagtggcgaaaagttgaag
cgcatcgaagctgatttgaagattctgaaactgcaggaagagattttaaactttctaact
gacgacgaagaaaagcaaaagattggaaatcggcttcttcctccagtggaccttattgag
ctgtgcctcaaaagctcgaaccaagagctctcattgcgggcttttgatgtgtttgcatgg
accagttcctccttccttaaatccaacagaagcctattggaggagtgctggaggaatgta
gccaatcaggacgattgggaaacaatctaccgaacatctgaagctgaagggtggagtgac
gaagaaaccgtacagcatttgagagaaacaatgcttttccaagcttcaagtaggtgctac
ggaccagaagcggacactatagaaggtgggtttgatgaagtgctgccacttaggcaagaa
aattcggagattcccatgctgaaagatatgggttcttctgtggaagggatattgatgcag
cacaaggattttcccgaggcaggaaagctaatggtgatggcaatcatgttggaatttggc
cgagttggtgccgaaatgggagatggtccttctccaatgcagtga
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integrated database retrieval system
