Rhododendron vialii: 131322897
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Entry
131322897 CDS
T09330
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
rvl
Rhododendron vialii
Pathway
rvl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131322897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131322897
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
131322897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
131322897
NCBI-ProteinID:
XP_058210443
LinkDB
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Position
4a:6129952..6138173
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AA seq
491 aa
AA seq
DB search
MQSDLGKLFIGGISWDTNEERLKEYFSDFGEVLESVIMKDRSTGRARGFGFIVFADPIVA
ERVIREKHNIDGRMVEAKKAVPRDDQNTMSRSISSIQGSPGPIRTRKIFVGGLASTVTET
DFKMYFEQFGIITDVVVMYDHNTQRPRGFGFITYDSEDAVDKVLLKTFHELNGKMVEVKR
AVPKELSPGPSRSPLSGYNYGVSRINSILSGYTQGYSPTTGGYGLRMDGRFSPIAGGRSG
YAPFGSGYGVGLNFEQGLTPNLAASANFNNTLSYGRGLNPYYMGNSNRFVNPVGYDEGNG
GNNSLFSSGNRNLWGNGGLNDGTNSTNSNAYVGSAGGTIGSTFANSGVNWGPSLISGQGG
GNISGRGGNLGYGGGDNSYGLGGGSYASNNATVRPASSSFAVSNGGYDGAFSDFYSGSSV
YGDPTWRSTNSETEREGSGSFGYGLRNGASDVLARSPSGYVGGYSVTERQTNGGRLAYCH
LSANTEAKSLE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctgatcttggaaaattattcattggtggaatttcctgggacacaaatgaagaa
cgtctgaaggagtattttagtgatttcggggaagttttggaatcagtaattatgaaggat
cggagcacagggcgcgcccgcgggtttgggtttattgtttttgcagaccctatagtggca
gagagagtgattagggagaaacacaacatcgatggaagaatggttgaggcgaaaaaggct
gttccaagggatgaccagaacacaatgagtagaagcattagtagcattcagggctctcct
ggcccaatacgcacaaggaagatatttgttggaggtttagcttccacagtaacagagacc
gacttcaaaatgtattttgagcagtttgggatcatcacagatgtcgttgtcatgtatgat
cacaacactcagagaccaagagggtttgggttcatcacatatgactcggaggacgccgtg
gacaaagtgttgctcaaaactttccatgagctcaatggaaaaatggttgaggtcaagcgt
gcagtccccaaagagttgtcaccgggtcccagcagaagcccacttagtggatataactat
ggtgtgagcagaatcaatagcattctcagtggatacacgcaagggtactctcccactact
ggaggctatggtcttagaatggatggaagattcagtccaattgctggaggtcgaagtggg
tacgctccatttggttcgggttatggagtgggtttgaactttgaacaagggttgacccct
aatcttgcagcaagtgccaacttcaataatactctcagctatgggcggggattgaaccct
tattatatgggcaattcaaataggtttgttaatcccgttggatatgacgagggtaatgga
ggaaacaattccttatttagctcaggaaatcgaaatttgtggggtaatggagggctaaat
gatgggactaactctacaaattcgaatgcctatgtggggtctgcaggtgggaccattgga
agcacttttgctaacagtggagttaattggggtccttcgctaatctcaggccaaggtgga
ggtaatatttctggccgtggtgggaatcttggttatggaggtggtgataacagctatggt
ttgggagggggcagctatgcaagcaataatgcaactgttaggcctgcctcatcatctttt
gctgtgtcaaatggcggttatgatggggctttttcagatttttatagtggcagttcagtt
tacggggaccctacttggcgttccacaaattctgagactgagagagagggatctggttca
tttggttacgggcttcgcaatggagcatccgatgttcttgctagaagtccttcaggttat
gttggtggttacagtgttactgagagacaaacaaatggcggccgtcttgcctattgccat
cttagtgccaacactgaggccaaatctttggaataa
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