Rhododendron vialii: 131322898
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Entry
131322898 CDS
T09330
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
rvl
Rhododendron vialii
Pathway
rvl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
131322898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rvl04121
]
131322898
Ubiquitin system [BR:
rvl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
131322898
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_6
LRR_4
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
131322898
NCBI-ProteinID:
XP_058210458
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Position
1a:47834445..47838653
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AA seq
581 aa
AA seq
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MAHSFPEEVLEHVFSFVHTDKDRNSVSLVCKSWYEIERWSRRRIFIGNCYAASPGILIRR
FPEVRSVEIKGKPHFADYNLVPEGWGGYVYPWIVAMARAYPWLEEIRLKRMVVSDEALEL
VSRSFKSFKVLALSSCEGFTTDGLAAIASNCKNLRELDLQECDVDDQSGHWFCHFPDTFT
SLVSLNIACIESDVSLPALERLVARCPNLRSLRLNRAVPLERLPNLLCRAPQLVEFGTGA
YSAEIRADVLVSLTTAFSGCKYLKGLSGFWDVVSAYIPAVHTLCSGLTCLNLSYANIQTP
DLGKLVSLCHNLQRLWVLDYIEDSGLDALAAFCKDLRELRVFPSDPFGPEPNVSLTEQGL
VSVSEGCPKLESVLYFCRQMSNAALTAIANNRPNLTRFRLCILEPRAPDYLTLEPLDTGF
GAIVERCKDLRRLSLSGLLTDRVFQYIGTHGKKIEMLSIAFAGDSDLGLHHVLSGCESLK
KLEIRDCPFGDKALLANAAKLETMRSLWMSSCQVSYGACKLLGQKMPRLNVEVIDERGPP
DSRSESSLVEKLYIYRTVAGRRMDMPNFIWKIDDNANFGLS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggctcactcattcccagaggaagtactagagcacgtgttctccttcgtccacaccgac
aaggaccgcaactcggtctccctcgtctgcaagtcctggtacgagatcgaacggtggagc
cggcgccggatcttcatcggcaactgctacgccgccagccccgggatcttgatccgacgg
ttccccgaggtcagatccgtggagatcaagggcaagccgcatttcgcggactacaacctg
gtgcctgaagggtggggtgggtacgtgtacccttggatcgtggccatggccagggcgtac
ccgtggctggaggagattcggctgaagaggatggtggttagtgatgaggccttggagttg
gtttcgaggtcgtttaagagcttcaaggttctggctttgtcgtcttgtgaggggtttacg
acagatgggttggccgccattgcctctaactgcaaaaatctcagagagctggatttgcag
gagtgcgatgtggatgatcagagtgggcattggttctgccattttcctgataccttcaca
tcattggtgtcacttaacatcgcttgtatagaatctgatgtgagtttgcctgccctagag
cgcttagtggctaggtgtcccaacctgaggagtctccgtctcaaccgtgctgtgccgctg
gagaggcttcctaatttactctgtcgtgcccctcagctggtcgagtttgggaccggtgcc
tattcagctgagatccgagccgatgtccttgtaagcttaactacagctttttcaggatgc
aagtatctcaagggcctttctgggttttgggatgtggtttcagcttacattccagcagtt
cacactctatgctctggactgacttgtctcaacttaagctatgccaatatccaaacccct
gaccttggcaaactagttagtctttgccataatttgcagcgcctctgggtactggattac
attgaagactctggccttgatgcccttgctgcattttgcaaggatctccgagaactgagg
gtattcccatctgatccatttggtcccgaacctaatgtatccttgacagaacaaggcctt
gtatctgtttcagagggatgccccaagcttgagtcagttctctatttctgtcgccagatg
tcaaatgccgcacttactgccatcgctaataaccgccctaacttaactcgtttccgcctc
tgcatccttgagcctcgtgctcctgattacctaaccctggagccgctggacacaggtttt
ggagctattgttgagcggtgcaaggatctacgccgcctttcgctatccggtcttctaaca
gatcgcgtgttccagtacattggcacccatggtaagaagatagagatgctttctattgct
tttgctggggatagtgatttggggctccaccacgtgctgtctgggtgtgaaagcctgaag
aaactagagattagagactgcccctttggagacaaggctttgttggccaatgctgcaaag
ctggagacaatgcgatccctttggatgtcttcttgccaagtaagttatggagcatgtaaa
ctacttggtcagaagatgccaaggcttaatgtcgaagtcattgatgagaggggaccacct
gattcgaggtctgaaagctctcttgtggaaaagctttacatatataggactgttgctggg
cgtaggatggatatgcctaatttcatatggaaaatagatgacaatgcgaattttgggcta
tcttga
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