Rhododendron vialii: 131322899
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Entry
131322899 CDS
T09330
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
rvl
Rhododendron vialii
Pathway
rvl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131322899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131322899
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
131322899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
131322899
NCBI-ProteinID:
XP_058210455
LinkDB
All DBs
Position
4a:6142353..6148431
Genome browser
AA seq
471 aa
AA seq
DB search
MQSDLGKLFIGGISWDTNEERLKEYFSDFGEVLESVIMKDRSTGRARGFGFIVFADPLVA
ERVTREKHNIDGRMVEAKKAVPRDDENTMSRSSSSIQGSPGPIRTRKIFVGGLASTVTES
DFKMYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKVLLKTFHELNGKMVEVKR
AVPKELSPGPSRSPLSGYNYGVSRINSILSGYTQGYSPTTGGYGLRMDGRFSPIAGGRSG
YAPFGVGLNFEPGLTPNLAASTNFNNSLSYGRGLNPYYTGNSNRFVNPIGYNEGNGGNNS
LFSSGNQNLWGNGGLNEGTNSTNSNAFGGSGGATIGSTFANNGVNWGPSLISGQGGGNIS
GRGGNLGFGGGDNSYGLGGGSYASNNAPGRPASSSFALSNGGYDGAFSDFYSGSSVYGDP
TWRSTNSEREGSGSFGYGLHNGASDVLARSSPGYVGGYSVTERQTNGGIAG
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcggatcttggaaaattattcattggtggaatttcgtgggacacaaatgaagaa
cgtctgaaggagtattttagcgatttcggggaagttttggaatcagtaattatgaaggat
cggagcacagggcgcgcccgtggctttggttttattgtttttgctgaccctttagtggca
gagagagtgactagggagaaacacaacatcgatggaagaatggttgaggcaaaaaaggca
gttccaagggatgatgagaacacaatgagtagaagcagtagtagcattcagggatctccc
ggcccaatacgcacgaggaagatatttgttggaggattagcttccacagtaacagagagc
gacttcaaaatgtattttgagcagtttgggaccatcactgatgtcgttgtcatgtatgat
cacaacactcagagaccaagagggtttgggttcattacatatgactcagaggatgctgtg
gacaaagtgttgctcaaaactttccacgagctcaatggcaaaatggttgaggtcaagcgt
gcagtccccaaagagttgtcacctggtcccagcagaagcccactgagtggatataactat
ggtgtgagcagaatcaatagcatcctcagtggatacactcaagggtattctcccactaca
ggaggctatggtcttagaatggatggaagattcagtccaatcgctggaggtcgaagtggg
tatgctccatttggagtgggtttgaactttgaaccagggttgacccctaatcttgcagca
agcacaaacttcaacaatagtctcagctatgggcggggattgaacccttattatacgggc
aattcaaataggtttgttaatccgattggatataatgagggtaatggaggaaacaattcc
ttatttagctctggaaatcaaaatttgtgggggaatggagggctaaatgagggaactaac
tcaacaaattcgaatgcctttggggggtctggaggtgcaaccattggaagcacttttgcc
aacaatggagttaattggggtccttcgctaatctcgggccaaggtggaggtaatatttca
ggccgtggtgggaatcttggttttggaggtggtgataacagctatggtttgggaggaggc
agctatgcaagcaataatgcacctggtaggcctgcctcgtcatcttttgctttgtcaaat
ggcggttacgatggggctttttcagatttttatagtggcagttcagtttatggggaccct
acctggcgttcgacaaactctgagagagagggatctggttcatttggttatgggcttcac
aatggagcatccgatgttcttgctagaagttctcctggttatgttggtggttacagtgtt
actgagagacaaacaaatggcggaattgccggttag
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