Rhododendron vialii: 131322963
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Entry
131322963 CDS
T09330
Name
(RefSeq) tRNase Z TRZ2, chloroplastic
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rvl03016
]
131322963
Enzymes [BR:
rvl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
131322963
Transfer RNA biogenesis [BR:
rvl03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
131322963
Prokaryotic type
131322963
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
131322963
NCBI-ProteinID:
XP_058210556
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Position
4a:7060786..7071379
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AA seq
346 aa
AA seq
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MHPSTPISTTSALPSLSPPQRPKLTHVKMTQTGPLNALKSTGFLSAIGRAIEDEEYRKAR
VEVNRKGLGLGGYSVEGVSLGGHETCVIVPELKAVFDIGRCLSRAVHQNFLFITHAHLDH
IGGLPMYIATRALYNLKPPTVFVPPCIKEDVEKLLDIHRNMSQVELNLELVALDVGETYE
MRNDLVVRPFKTYHVIPSQGYVIYSVRKKLRKKYMHLNGKEIEKLKKSGVEITDTILCPE
VAFTGDTMSDFFLDPRSADALRAKVLITEATFLDDVCSIEHAREHGHTHLFEIIEHAQWI
RNKAFLLTHFSSRYNMEDIRQAVSKLQPKVTAKVVALSEGFKSVNS
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgcacccatccacgcccatttcaacgacctcagccttaccatctctctccccacctcaa
agaccaaagctcacccacgtaaagatgacccaaaccgggcctctgaacgccctaaaaagt
actgggttcctgtccgcaatcggccgagcaatcgaagacgaagagtacaggaaagctcgg
gtcgaggtcaaccgtaaagggctcggtttgggagggtattcggtcgagggggtttcgctt
ggtggccacgagacttgcgttattgtgccggaattgaaggccgtgtttgacattgggagg
tgcctgtctagggctgttcatcagaatttcttgttcatcacccatgctcatcttgatcat
attggtgggctcccaatgtacatagcaactcgtgctttgtacaacttaaaacctccaacg
gtgtttgtgcctccttgcattaaagaggatgtggagaagttactcgacattcacaggaac
atgagtcaggtggaactgaaccttgaattggtggcattagatgtaggagaaacttatgaa
atgcggaatgatcttgttgtgcgaccatttaaaacttaccatgtcattcccagccagggc
tacgttatttactcggtcagaaaaaagttgaggaagaagtacatgcatttgaacggaaaa
gaaattgagaagttgaagaaatctggagttgagatcacagacactatattgtgtccagag
gtggcctttactggagatacaatgtcggatttttttcttgatccccggagtgctgatgcc
ttgagggcaaaagttcttataactgaggcaacgttcctggatgacgtttgcagcattgag
catgcacgtgaacatggccacactcatttgtttgagatcatagaacatgctcaatggatt
cgaaacaaagcttttttgctcactcatttctcgtcccgctataatatggaggacattcgc
caggcagtgtcgaaattgcaaccaaaggtgacagccaaagtggttgccctatctgaaggc
ttcaagtctgtaaactcatag
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