Rhododendron vialii: 131323301
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Entry
131323301 CDS
T09330
Name
(RefSeq) double-strand break repair protein MRE11
KO
K10865
double-strand break repair protein MRE11
Organism
rvl
Rhododendron vialii
Pathway
rvl03440
Homologous recombination
rvl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131323301
03450 Non-homologous end-joining
131323301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rvl03032
]
131323301
03400 DNA repair and recombination proteins [BR:
rvl03400
]
131323301
DNA replication proteins [BR:
rvl03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
131323301
DNA repair and recombination proteins [BR:
rvl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
131323301
BRCA1-C complex
131323301
NHEJ (non-homologous end-joining)
MRX complex
131323301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
ASTN1_2_fn3
Motif
Other DBs
NCBI-GeneID:
131323301
NCBI-ProteinID:
XP_058210999
LinkDB
All DBs
Position
4a:2978832..2989349
Genome browser
AA seq
734 aa
AA seq
DB search
MGDSSREDVKSTLRILVATDCHLGYMEKDEIRRHDSFQAFEEICSIAEQKQVDFLLLGGD
LFHENKPSRSTLVKAIEILRRHCLNDQPVQFQVVSDQTVNFANSFGHVNYEDPHFNVGMP
VFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGQIALYPILIRKGSTSVA
LYGLGNIRDERLNRMFQTPHAVQWMRPEPQEGCQVSDWFNILVLHQNRVKTNPKNAINEH
FLPRFLDFIVWGHEHECLVDPQEVPGMGFHITQPGSSVATSLIDGESKPKHVLLLEIKGN
QYRPTKIPLNTVRPFEYAEVVLKDETDIDPNDQNSMLEHLDKVVRNMIDKASQNHSNKSD
FKLPLVRVKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKASKKGRSEAKIDGSERLR
PEELNQQNIEALVAENNLKMEILPVNDLDVALHNFVNKDDKMAFYSCVKYNLEETRNKIA
KDADTVKFEEEDLLLKVGECLEERVKERSVHSKEPPFTSTSQSLEDTRSAGGVGSAVSFS
DDEDTTQFTGSMSASRGRKGSSVPFRASHDSEEVGKTSRGRGRGRGRGRGRGSTNLKQTT
LDASVGFRNTQRSASVAAAASVRSIADDEDNVDSGSSDEAWKKGVNEVDESSDDGETLRG
KGTKRAAPRGRRPAGPAPSKRGRKSDNSNTSSSIHKMLMSNDDDDDDDDDMSRRVNKSQP
RVTRNYGALRRQVP
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgggtgactcatcaagggaggatgtcaaaagtacactacggatacttgttgccacggat
tgtcatctgggctatatggaaaaggatgaaatacgtcggcatgattcattccaggcattt
gaagagatatgctcaatagcagagcaaaagcaggttgatttcttgctccttggtggcgac
cttttccacgaaaacaagccctcaaggtcaacattggtgaaagccattgaaattctgcgt
cgccattgtctcaatgatcaaccggtgcagttccaagttgtcagcgaccagactgtcaac
tttgcaaactcgtttggtcatgtaaattacgaggatcctcacttcaatgttggcatgcca
gtgttcagcattcatgggaatcatgatgatccagctggagtggacaacctctcggcagtt
gatatcctttctgcttgtaatctggtgaactattttgggaaaatggttcttggaggttct
ggtgtagggcagatcgctctatacccaattctcattaggaagggttcaacgtctgtggct
ctatatggccttggaaacattagagatgaacggcttaataggatgtttcagacgccgcat
gctgtacagtggatgcgacctgaacctcaagaaggatgccaagtatcagactggttcaac
attctagtacttcatcagaacagggtgaaaacaaatcctaaaaatgctatcaacgagcac
tttttgccacgttttctggacttcatcgtgtgggggcatgaacacgaatgtcttgttgac
cctcaggaagttccaggtatgggtttccacattactcagccaggctcttctgttgcaaca
tcactaattgatggagaatcaaaaccgaaacatgtacttcttttggagattaagggaaat
caatatcgcccaaccaagatacctttaaacacagttaggccttttgaatatgccgaggta
gtattgaaggacgaaactgacattgatcctaatgatcaaaattcaatgctcgaacatttg
gacaaagtggtcagaaatatgatagacaaggctagccaaaatcatagtaacaaatcagat
ttcaagcttccattggtccgagtaaaggttgattactctggatttatgacaataaatcct
caaaggtttgggcaaaaatatgtggggaaggttgcaaatccccaggatattctcatattc
tcaaaggcttcaaaaaaaggtcgcagtgaagccaaaattgatggttctgaacggcttcga
cctgaagaactaaatcaacaaaatatagaggctttggttgctgagaacaacctgaaaatg
gagatccttccggttaatgatttggatgttgcactgcacaattttgttaacaaggacgat
aaaatggctttctattcatgtgtgaagtacaaccttgaagaaacacgcaataaaattgct
aaagatgcagatactgtaaagttcgaagaggaagatctacttctcaaagttggagaatgc
ttagaggaacgtgtgaaggaaaggtcagtacattctaaggaaccaccgttcacttctact
tcacagtccttagaggacactagaagtgctggaggagttggaagtgcagtttccttcagt
gatgatgaggataccactcaatttacaggttcaatgtctgccagcagaggtaggaaagga
tcatctgtacctttcagggcctctcatgattctgaagaagttggtaagacttcaagaggc
aggggcaggggcagaggaaggggaagaggcaggggctctactaacttaaagcaaacaact
cttgatgcatcagttggattccgcaatacacagagatctgcatcagttgcagcagcagca
tcagtccgaagcatcgctgatgatgaggataacgtggattctggttcaagtgatgaagcg
tggaaaaagggtgtaaatgaagttgatgaaagctctgacgatggtgaaacccttcgaggc
aagggaaccaaaagagctgctcccagaggtagacgtcctgcaggacctgcaccatctaaa
cgaggaagaaaatcagacaactccaacacttcatcttcgatccataaaatgctcatgagt
aatgacgacgacgatgacgatgatgatgacatgtcaaggagagtaaataagtctcaaccg
cgggtaacaagaaattatggtgccctgagaagacaagtgccctag
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