Rhododendron vialii: 131323447
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Entry
131323447 CDS
T09330
Name
(RefSeq) long chain acyl-CoA synthetase 8-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rvl
Rhododendron vialii
Pathway
rvl00061
Fatty acid biosynthesis
rvl00071
Fatty acid degradation
rvl01100
Metabolic pathways
rvl01212
Fatty acid metabolism
rvl04146
Peroxisome
Module
rvl_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
131323447
00071 Fatty acid degradation
131323447
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
131323447
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rvl01004
]
131323447
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rvl04147
]
131323447
Enzymes [BR:
rvl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
131323447
Lipid biosynthesis proteins [BR:
rvl01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
131323447
Exosome [BR:
rvl04147
]
Exosomal proteins
Exosomal proteins of breast milk
131323447
Exosomal proteins of breast cancer cells
131323447
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
131323447
NCBI-ProteinID:
XP_058211235
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Position
4a:complement(4581380..4589581)
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AA seq
717 aa
AA seq
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MEKMAGSDYSSIFKDHGVSGIMVGVVAALVPLLVSFILVGKRKVKQRGVPVEVGGEAGVA
MRNARSAKLIEVPWEGATTLAALFEQSCKKHSQQRFLGTRKLISREFITASDGRKFEKLH
QGEYQWETYGEVFDHACNFASGLIKLGHDVNTHAAILSESRAEWLIAFQGCFRQNITVVT
IYASLGEDALIHSLNETQVSTLICDSKQLKKLAAISSSLTHIQNVIYFEDDETGAESNLS
RNTSTWTVKSFLEVEELGKRSPVHPRLPVSEDVAVVMYTSGSTGLPKGVMITQGNLVATS
AAVMTVIPKLGRNDVYLAYLPLAHVLELAAESIMLSAGCAIGYGSALTLTDTSNKIKKGT
KGDASELKPTLMVAVPAILDRVRDGVSMKVVEKGGFAKKLFNMGYKRCLASIEGSWLGAW
GVEKLLWDAIVFKKIRSILGGNIRFILCGGAPLSGDTQRFINICMGAPIAQGYGLTETCA
GAAFTEWDDSSVGRVGPPLCCCYIKLVSWEEGGYTTSDKPMPRGEVVVGGFSVTAGYFNN
DAKTKEVYKVDERGIRWFYTGDIGQFHADGCLEIIDRKKDIVKLQHGEYISLGKVEAALM
TSNYVDNVMVYADPFHNYCVALVVPSRHILETWAKEAGMTYGDFPELCDKVEAVKEVQQS
LLKAAKAAKLDKFEIPAKIKLMSDPWTPESGLVTGALKIKREQLKAKFKDELQQLYV
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatggccggcagtgattactcatccattttcaaagaccacggagtgtctggt
atcatggttggggttgttgctgcacttgtacctttgttagtttcattcatacttgtgggg
aagagaaaggtaaaacagagaggggttccagtagaggttgggggtgaggcaggtgtagca
atgcgcaatgctagatcagccaaattgattgaagttccttgggaaggggccacaactttg
gctgctctatttgagcagtcttgcaagaagcattcacagcaacgatttcttggaacaaga
aagctaattagtagggagttcatcactgctagtgatgggaggaagtttgagaagctacac
caaggagaatatcagtgggagacttatggggaggtgtttgatcatgcttgcaatttcgcc
tcaggactgattaaattaggtcatgatgtgaatactcatgcagccattctttctgagtca
cgagcggagtggttaattgcctttcagggctgcttccggcagaacattactgttgtcact
atatatgcgtccctgggcgaagatgccctgatccattcactcaatgagacccaagtgtca
acactgatatgcgattccaagcaattgaaaaagttggctgcaataagttcgagtctgacc
catatacaaaatgtgatttactttgaagatgacgaaactggagccgagtccaacttatcg
agaaacacgagcacgtggacagttaaatcttttttggaggtggaggaactggggaaaagg
agtcctgttcatccaagactccctgtcagtgaggatgttgctgttgtcatgtatacgagt
ggtagcacgggtctaccaaagggagttatgattacccaaggaaaccttgtagcgacatca
gctgctgttatgacagtgattccgaaactaggaagaaatgatgtttacttggcatacttg
cctctggctcatgttcttgagttggcagctgagtctattatgttgtccgcaggttgtgcc
attggttatggttcggcactgacattaactgacacttctaacaaaatcaagaagggaacc
aaaggagatgcttctgagttaaagcccaccctaatggtggcagttccagcaattttagat
cgtgtgcgggacggtgtttcaatgaaggttgtggagaagggtggttttgcaaagaaactt
ttcaatatgggatataagcgctgcctggcatccatagaaggaagctggcttggtgcctgg
ggagtagagaaattactgtgggatgccattgttttcaaaaagatacgttccatacttgga
ggaaacatccggttcattctctgtggtggagctcctttatctggagatacacagcggttt
atcaatatctgcatgggggctcctattgctcaaggatatggcctcacagaaacatgtgcg
ggagctgcttttactgagtgggatgacagttctgttggccgtgttggtccgccactttgt
tgttgttacattaagcttgtttcatgggaagaaggtgggtacacaacatcggacaagcct
atgcctcgaggagaggttgtagttggtggatttagtgttactgccggttactttaacaat
gatgcaaaaacaaaagaggtgtacaaggttgacgagaggggcattcgctggttttatact
ggtgacataggacagtttcacgctgatggatgcctcgaaattattgatagaaagaaggat
attgttaaacttcaacatggagagtatatctccctcggcaaggtagaggcagcactgatg
acaagcaactacgtcgacaatgtcatggtatatgcagatcctttccacaactattgtgtg
gctcttgttgttccctcacgtcacatccttgagacgtgggccaaagaggctgggatgaca
tatggggattttcctgagttgtgtgacaaggtagaagctgtcaaggaggtccagcaatcc
cttctgaaggcggccaaagctgcaaaattggacaagtttgaaatccctgcaaagattaag
ttgatgtcggatccatggacacctgagtcaggattggttactggtgctctcaaaataaag
agggaacaattgaaggccaagttcaaagatgagctgcaacagttatatgtgtga
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