Rhododendron vialii: 131323448
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Entry
131323448 CDS
T09330
Name
(RefSeq) THO complex subunit 4B-like
KO
K12881
THO complex subunit 4
Organism
rvl
Rhododendron vialii
Pathway
rvl03013
Nucleocytoplasmic transport
rvl03015
mRNA surveillance pathway
rvl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131323448
09122 Translation
03013 Nucleocytoplasmic transport
131323448
03015 mRNA surveillance pathway
131323448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131323448
03041 Spliceosome [BR:
rvl03041
]
131323448
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
131323448
TREX complex
131323448
Spliceosome [BR:
rvl03041
]
Complex C
Other components
EJC/TREX
131323448
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
131323448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
Kdo_hydroxy
Motif
Other DBs
NCBI-GeneID:
131323448
NCBI-ProteinID:
XP_058211276
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All DBs
Position
1a:41656992..41660534
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AA seq
239 aa
AA seq
DB search
MSGAASLDMTLEDLIKTNKKSGRGGGGNFRGRGRASSGPGPARRFPNRAANRPSPYFNPK
AADQVMAYPVQAGGRPSSIETGTKLYVSNLDYGVSNDDIKELFSEVGDLKRYSIHYDRSG
RSKGTAEVVFSRRQDAQAAVKRYNNVQLDGKPMKIEVVGTNIGAPAMPPPFANASFRISN
GVPGSGQGRGGALGRIRGVGGGRGFGRGRGQGRGRGEKISAEDLDAELEKYHTEAMQIN
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcgctgcttccttggacatgacccttgaagatctgattaagaccaacaagaaa
tctggccgcggcggcggcggtaactttagaggcagaggccgagcctcctccggacccggc
cctgctcgccgctttcccaaccgcgctgccaatcgaccttcaccctactttaaccccaag
gcagcggatcaggtgatggcgtacccagtacaagcgggtggtcgaccctcgtcgatagaa
acgggaacgaagctctacgtatccaacctagactacggcgtttcgaacgatgacatcaag
gaactcttttcagaggttggtgacttgaaacgatattcaatacattatgataggagtggg
agatcaaagggaacggcagaagtcgtcttttcacgacgacaggatgctcaagcagctgtc
aagaggtacaacaacgtgcagcttgatgggaagccaatgaaaattgaggttgtggggaca
aatattggagctcctgccatgcctcctccatttgcaaatgcttctttcagaatttcaaat
ggtgttccaggaagtggacaaggaaggggtggtgcactcgggaggatccgtggggtcggc
ggaggccgtggatttggaagaggccgtggacagggaagagggcgtggtgagaagatatct
gcagaagatcttgatgctgagttggagaagtatcacacagaggcaatgcagatcaattga
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integrated database retrieval system