Rhododendron vialii: 131323585
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Entry
131323585 CDS
T09330
Name
(RefSeq) vacuolar protein sorting-associated protein 36 isoform X1
KO
K12190
ESCRT-II complex subunit VPS36
Organism
rvl
Rhododendron vialii
Pathway
rvl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
131323585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rvl04131
]
131323585
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rvl04147
]
131323585
Membrane trafficking [BR:
rvl04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
131323585
Exosome [BR:
rvl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
131323585
Exosomal proteins of colorectal cancer cells
131323585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
MKT1_C
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
131323585
NCBI-ProteinID:
XP_058211424
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Position
1a:complement(16767113..16788858)
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AA seq
457 aa
AA seq
DB search
MAGKWLPAAELTGSGRPVLQQGEVECSLLSSVDVECEDNPTSFPLLKSGLLIVTTHRLLW
IPSDGATACAIPLAAVSHVFSSSSSSSNHKKKSVIKTMFSSPRVRFQVSVASEGRVDERG
TGSMVITLVLRGKNSDPDSLLGKLLEAWRGRAWESTSGGSGSGKFDGGSSSGGGGLRMPV
VGVSGILRKEQEMWESTDKSLQDAFQDLNALMSKAKEMVMLAETMRLKLLSGSNNQASVA
NDEDEMVSKEEMQDWLLSVGIASPVTKESAGALYHQQLSRQLADFVKISLERSGGMINLI
DIYCVFNRARGTELISPEDLLQACSLWKNADVPVMLRKFDSGVMVIQNKSYNDEKVLSGI
KSLALKPEALQTGISASDAAIMLGIAPAMAKEHLLTAESKGLLCRDVSPDGFRFYVNLFQ
DINLDDVYLIGWTLKCAEILSSGLPTCFDFISHHFPV
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggccgggaagtggttacctgcggccgaactcacggggagcggccggccggtgctccag
caaggtgaggtggaatgctccctcctctcctccgtcgacgtcgagtgcgaagacaaccct
actagtttccctctcctcaaatccggactcctcatcgtcaccacccaccgccttctctgg
atcccctccgacggcgcaaccgcatgcgccatccctctcgccgccgtctcccacgtcttc
tcctcctcttcctcctcttctaatcataagaagaagtcggtgatcaagaccatgttctcc
agccctagggttcggttccaggtctcagttgcatccgaaggaagagtggacgagagagga
acggggtctatggtgatcacgcttgtcttgaggggtaagaactccgaccctgattcgctt
ttggggaaacttttggaggcgtggagggggagagcttgggagagtacttctggtgggtca
ggttcaggaaaatttgatggtgggtcgagttctggaggaggaggattgagaatgccagtt
gttggagtttccgggatactgaggaaggaacaagagatgtgggagagcactgataaaagc
ttgcaagatgcttttcaggacttgaatgctctcatgagcaaggccaaagagatggttatg
cttgcagaaacgatgaggctaaaacttttatcaggttcaaataatcaagccagtgtagca
aatgatgaggacgagatggtttccaaagaagagatgcaagattggttactgagtgttggt
attgcatccccagtcacaaaagagtctgctggtgctttatatcaccagcagttgtcgcgt
cagttggcagattttgtcaaaatctcattggagagatctggaggaatgatcaatctaata
gatatttattgtgtcttcaatcgtgcacgtggtacagaactgatctcacctgaggattta
ttgcaagcgtgttctctttggaagaatgctgatgttccagtaatgctccggaagtttgat
agtggtgtcatggtcatccaaaacaagtcatacaatgacgagaaggttttgtcgggaatc
aagtcacttgcattgaagcctgaagccctccaaactgggatcagtgctagtgatgctgct
attatgctggggattgctccagctatggctaaggagcatctgctaactgctgagagcaag
ggtctcctgtgcagagatgtaagccctgatggctttcggttttatgtcaatctgtttcaa
gacatcaatctagatgacgtatacctaattggctggacacttaagtgtgcagagattctt
tcttctggtctgcccacctgttttgacttcatctctcatcactttcctgtttag
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