Rhododendron vialii: 131324231
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Entry
131324231 CDS
T09330
Name
(RefSeq) protein argonaute 10-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131324231
03036 Chromosome and associated proteins [BR:
rvl03036
]
131324231
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
131324231
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
131324231
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
131324231
microRNA pathway
RISC loading complex
131324231
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
131324231
NCBI-ProteinID:
XP_058212098
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Position
4a:38387249..38398758
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AA seq
995 aa
AA seq
DB search
MPMRQMKESSEKHIVIKPQLQNTMNEVQKPSKAAQNGKGPPAQEPQNTKLHNQTSPPSRN
RGRRRRRGGRKSDQADVFMRPSSRPCTGEHKAGPGQLTGDVEADIPNGSIENGTNGNSCE
VEMGLGFPCSRKSLNFAPRPGFGQLGTKCVVKANHFFAELPNKDLTQYDVTITPEVVSRT
VNRAIIAELVKVYKESDLGKRLPAYDGRKSLYTAGELPFVRKEFNVKVVDEEDGINGPKR
EREYKVVIKYVARANMHHLGQFLAGKRVDAPQEALQILDIVLRELSTKRYCPVGRSFVSP
DIRKPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMACAAFIEALPVIEFVAQLLGKDVIS
RPLSDADRVKIKKGLRGVKVEVTHRGNVRRKYRVSGLTSQPTRELVFPVDDNSTMKSVVE
YFQEMYGFTIQHTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQ
RPRDRENDILQTVQHNAYDQDPYANEFGIKISEKLASVEARVLPAPWLKYHETGKEKDCL
PQVGQWNMMNKKMINGMPVNRWACINFSRGVQESVARGFCNELALMCQVSGMEFNPEPVI
PIYNAKPEQVEKALKHVYHASMNKLKGKELELLLAILPDNNGSLYGDIKRICETELGLIS
QCCLTKHVFKISKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHP
ENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGTVSGGMIR
DLLVSFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVV
QKRHHTRLFPNNHRDRSSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHY
HVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMQENG
GGGSQVGKNTHANRESGVRPLPALKENVKRVMFYC
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgcctatgaggcagatgaaagagagctcagaaaaacacattgtgatcaaaccccagttg
caaaacaccatgaatgaagttcagaaaccctccaaagctgcccaaaatggaaaaggccca
ccagcccaagaaccccaaaacactaaactccataaccagacctcacctccttcaaggaat
agaggtaggaggaggaggagaggcggccggaaatcggaccaagctgacgtttttatgcgg
cccagctcgcggccttgcaccggagagcataaggcgggtcccggccagctgaccggagat
gtggaagctgatataccaaatgggtcaattgagaatgggaccaatggcaactcatgtgaa
gtggagatgggtttgggttttccttgttcaagaaagtctttgaattttgctcctaggcct
gggtttgggcaacttggaacaaaatgtgttgtgaaggccaaccacttctttgcagagtta
ccaaacaaggatttgacccagtatgatgttaccataactccagaagtagtatcgagaacc
gtgaaccgagctatcatagcagaactcgtgaaagtgtacaaagaatctgacttggggaag
agattgccagcttatgatggtagaaagagtctttacacagccggtgagctgccctttgtt
aggaaggagttcaacgttaaagttgttgatgaagaggatggaatcaatggtcctaaaaga
gagagggagtacaaagtggtcatcaagtatgttgcaagggcaaacatgcatcatttgggc
caatttcttgcgggtaagcgtgttgatgctccgcaagaagctcttcaaattctggacatt
gtcttgagggagctgtcaacaaaaaggtactgccctgtcgggagatcctttgtttcacca
gatattcggaaaccacaaaggcttggcgagggtttggaatcatggtgtggattctaccag
agtattagacctacccagatgggattatcccttaatattgatatggcttgtgctgccttt
attgaggctctccctgtaatagagtttgttgcccagcttctaggtaaagatgtgatctcg
aggccattgtctgatgctgaccgtgtaaagatcaagaagggccttagaggagtgaaagtc
gaagtaacacataggggtaatgtccggagaaagtaccgggtttcaggattaacttctcaa
cccacaagagaactagtctttcctgttgatgacaactcaaccatgaagtcagtggtagaa
tactttcaagaaatgtatggcttcacaattcaacatacacatcttccttgccttcaagta
ggaaaccagaagaaggcaaactatttgcctatggaggcctgtaagattgttgaggggcag
cgatataccaaaaggttgaacgagaagcaaattacagctcttctaaaagtcacatgccag
aggccaagggatcgagaaaatgacatattgcagacggtccaacacaatgcttatgatcaa
gacccatatgctaatgagtttggaatcaagatcagcgaaaaactagcttctgtggaggca
cgagtactccctgctccttggctgaaatatcatgaaactgggaaggaaaaggattgtttg
cctcaagttggtcaatggaatatgatgaacaagaaaatgattaatgggatgccagtcaac
cgatgggcatgcatcaacttctcacgtggtgtgcaagagagtgttgctcgggggttttgt
aatgaactggctctaatgtgtcaagtgtctggcatggaattcaatccagaacctgtgatt
ccaatctacaatgccaagccagagcaagtagagaaagcattgaagcatgtatatcatgca
agcatgaacaaactgaaaggaaaagaattggagcttcttttagctattttgccagacaac
aacggatccctctatggtgatataaagcgaatatgtgaaaccgaacttggtttgatatca
caatgctgtctgacaaaacatgttttcaagattagcaagcaatacctggctaacgtgtca
ttgaaaatcaatgttaagatgggtggtcgaaacacagttcttttggatgccatcagctgt
agaataccgttagttagtgacataccgactattatatttggagcagacgtgactcaccca
gagaatggagaagactcaagtccctcaatagctgctgtagtagcttctcaggattggcct
gaagtcacaaagtatgctggattggtttgtgctcaagctcatagacaggaactcatacaa
gacttgtacaaaacatggcatgatcctgtccgaggcacagttagtggtggcatgatcagg
gatcttcttgtgtcatttcgtaaggcaacagggcagaagccattgaggattatattttac
agggatggtgtgagtgaaggacagttttatcaagtcctgctttacgagttggatgcaatt
aggaaggcttgtgcttcattagaaccgaactatcaaccgccggtgaccttcattgtggtg
caaaaacggcatcacaccagattatttcctaacaatcatagggaccgtagcagcaccgac
aagagtggaaacatcttacctggcactgtggttgattctaaaatctgtcatccaacagaa
tttgacttctacctctgcagtcatgccgggattcagggtacaagtcggcctgctcattac
catgttttgtgggatgagaacaattttacagcagatggaattcaatcattgacaaacaat
ctgtgttacacatatgcaaggtgcactcgctccgtctcagttgtgccacctgcatattat
gctcatttagcggcatttagagccagattctacatggaaccagatatgcaagaaaatggt
ggtggtggcagtcaagttggcaagaatactcatgctaatagagagtctggtgtacggcca
ttaccagctctgaaggagaacgtaaaaagagtaatgttttactgctag
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