Rhododendron vialii: 131324291
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Entry
131324291 CDS
T09330
Name
(RefSeq) nuclear pore complex protein NUP93A isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
rvl
Rhododendron vialii
Pathway
rvl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131324291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131324291
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131324291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
131324291
NCBI-ProteinID:
XP_058212186
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Position
4a:15478836..15492408
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AA seq
871 aa
AA seq
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MASDTEMGSWTDLLHSSSKLLEQAAPSAQFPPLQRNLDQLEALSKKLKAKTLRTEAPTQS
IAATRLLAREGINAEQLARDLKSFELKTTFEDVFPAEATSVEEYLQQVHEMAMVSAIQEA
QKDNIRSFNDYMMTVLQEDWQKEKRDFLQSVSRISMLPKTNLGVSNTGGARPDQIMSLTS
GTQVSSGQSSMEIAPLPNKPVLEKKAAFYADVVKNLNHARERGLPFKPATAFKGAYESLG
LDVSGGKSVTMQKIWHLIQTLMGEGPTVQWNVSKKMSLVIGARRHLEWGHEKYIVDTIHS
HPAQAALGGAVGNLQRIHAFLRVRLRDYGVLDFDAGEACRQPPVDTTWQKIYFCLRTGYY
DEARKVASSSRVSLHFAPQLSEWVATGGMVSPETAAAASEECEKLLRMGDRVGRAAYDKK
KLLLYAILSGSRRHIDRLLREFPTLFNTIEDFLWFKLSAIRDYPGGSNSVVPNEGYSPYS
LDDLQVYLNKFEPSYYTKNGKDPLVYPYVLLLSIQLLPAMLYLSKDMGDEGYNVDAVHIS
IVLADHGVLSVSAEAGQKLRVMDAFAEASSIIRQYGSVYLRHENLSLALEYYVQAAAAVG
GGQLSWSGRGNVDQQRQRTLVLKQLLTELLLRDGGINLLLGPRGAGEEGELERVFTDVKT
RQQFLLEAAHRCQEAGLYDKSIEIQKRVGAFAMALDTINKCLSEAICALSRGRLDGESHT
AGLLHSGNEILQTYKYYPEVSLQERELVLEQQTVLMQLDAILSIHKLARVGRHLDALREV
AKLPFLPLDPRAPDLANDMFQSLSHHVQACVPDLLKVALHCLDNLTDSDGSLRALRTKVC
LAVLRVDLSFSFCYLIWLLVYHNCDCSCGGV
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgacacagagatgggtagctggaccgatcttctccactcatcctcaaagctt
ctcgaacaagccgctccctcagctcagtttcctcctcttcagaggaacttagatcaattg
gaggctttgtcgaaaaagctcaaggccaaaaccctaagaactgaagctcctactcaatct
attgctgccacgaggctattggcccgtgaaggaataaatgcagagcaacttgctcgagat
cttaaatcttttgaattaaagacgacttttgaggatgttttccctgccgaggcaacaagt
gtggaagaatatctgcagcaggtacatgagatggcaatggtttcagctattcaggaagct
caaaaggataatattagaagctttaatgattatatgatgacagttttgcaggaggattgg
caaaaggaaaaacgggacttccttcaaagcgtgagccggatttctatgttaccaaagaca
aatttgggtgtttcaaatacggggggtgctcgtcctgatcaaattatgtctttgacttcg
ggaactcaggtttcatctggtcagtcaagcatggagattgcacctctacccaataagcct
gtccttgagaaaaaagctgcattctatgctgacgttgttaagaatctcaatcatgcaaga
gagcgcggtttgccatttaagcctgctacagctttcaagggtgcttatgagagtttgggg
cttgatgtttctggtgggaaatcggttacgatgcagaaaatatggcacctaattcagaca
ctgatgggtgagggcccaactgttcagtggaacgtttcaaaaaaaatgtctttggtgatt
ggtgcaaggcgccacctcgaatggggacacgagaagtatattgtagatacaatacacagt
catcctgctcaggctgctcttggtggggctgttggcaatttgcaaagaatacatgcattt
cttcgggttcgtttaagggattacggggttctagattttgatgcaggggaagcttgtcgg
cagcctcccgttgatacgacatggcagaagatttacttttgcttgagaactgggtattat
gatgaagcgaggaaggttgcctcatcttcgcgtgtttcactccactttgctcctcagctt
tcggaatgggttgctactggaggaatggtatcaccagagacagctgctgctgcttcagaa
gagtgtgagaagttgttgaggatgggtgatcgtgttggtcgagctgcgtatgacaagaaa
aagttgctactatatgcaatactatctggttctcgtaggcacattgaccgccttcttaga
gaatttcctacacttttcaacaccatagaggatttcttgtggttcaaattgtctgctatc
cgagactatcctggaggatctaattctgttgtcccaaatgaaggatattcaccctatagt
ttggatgatttgcaggtttaccttaataaatttgagccatcgtattacacaaagaatgga
aaggaccctttggtgtatccgtatgttttgcttttgagcatccaattgcttcctgccatg
ctatatctctccaaggatatgggagatgaagggtataacgtagatgctgtgcacatatct
attgtgctggcggaccatggtgtcctttctgttagtgctgaggcagggcaaaaactgagg
gtgatggatgcttttgcggaggcatctagcataatcaggcagtatggatcagtctatctg
cgccatgaaaatctttcgttggcattggagtattacgtgcaagctgccgctgcagtgggt
ggtggccaattgtcatggagtgggagaggtaatgtagatcagcaaaggcagagaaccttg
gtgctgaagcaactccttacagagctgttgttacgggatggaggaattaatcttttactt
ggtccaagaggtgctggagaagaaggtgaactggaaagggtttttactgatgtaaaaact
agacaacagtttctgcttgaagctgctcaccggtgtcaggaagctgggctttatgacaaa
tctattgaaatccagaagagagttggtgcattcgcaatggcattggacacaataaataag
tgcctttctgaagcaatttgtgcgctatcacgtggtagattggacggtgagagccatact
gctgggctcctccattctgggaatgagattttgcagacgtacaagtattatcctgaagtc
agtcttcaagagagagaacttgttttggaacaacaaactgtgttaatgcagcttgacgcc
atattgtctatccataaattggcaagagtgggtcgtcatttagatgctctaagggaggtt
gccaaactcccatttcttcctttagatccacgagcgccagatttagcaaatgatatgttc
cagagtttatctcaccatgtccaagcttgtgtgccagaccttctgaaggttgctcttcat
tgcttggacaatctcactgattcagatggatcacttcgtgccttgaggaccaaggtatgt
ttggcagtattgagagtagacctttctttctctttctgttatctgatttggttgctcgtt
taccataattgtgattgtagttgtggtggagtttag
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